Transcript Information: S_Transcript_123976.p1


Annotated TAIR IDAT5G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21207097-21207678 | Reverse length=145
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5047530574288
Replicate 20.77868669026523
Replicate 30.65092009706826
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20.2631982192909
Replicate 31.0030987108226
Condition 3: 24 Hour
Replicate 10.25699862930111
Replicate 21.0665323094752
Replicate 30.29672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123976.p1 GENE.S_Transcript_123976~~S_Transcript_123976.p1 ORF type:complete len:85 (-),score=12.96,Ctf8|PF09696.6|3.8e-10 S_Transcript_123976:199-453(-)
ATGAAGACTTACAGCTTCACTTGTGTCCTCCAGGAGACGTACACTTTTACCATAGGGTACCATGAATTGACAGGGTCCAAGGTGGCTCTGAAAAAGCCGCTATTAGTGCTCAAGAAAGTGAAGCATTCAGGTGCTGATCAAAATGGAAGATCTCAGTCTTCAACGGCAGAGTTAGATGTGATCGGAGTTATTAGGCAGAAGATTCTGTTCAAGACTCGACCAAAGGCCCTCATAACCAGCAGCAGCAAGAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123976.p1 GENE.S_Transcript_123976~~S_Transcript_123976.p1 ORF type:complete len:85 (-),score=12.96,Ctf8|PF09696.6|3.8e-10 S_Transcript_123976:199-453(-)
MKTYSFTCVLQETYTFTIGYHELTGSKVALKKPLLVLKKVKHSGADQNGRSQSSTAELDVIGVIRQKILFKTRPKALITSSSKN*

Click here to download the sequence:
Link to NCBI Protein BLAST