Transcript Information: S_Transcript_123982.p1


Annotated TAIR IDAT5G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21207097-21207678 | Reverse length=145
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42242859103461
Replicate 20
Replicate 30.58548368519367
Condition 2: 8 Hour
Replicate 10.16924912950106
Replicate 20.88777177141772
Replicate 30
Condition 3: 24 Hour
Replicate 10.17337209119519
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123982.p1 GENE.S_Transcript_123982~~S_Transcript_123982.p1 ORF type:5prime_partial len:126 (+),score=9.53 S_Transcript_123982:1-378(+)
CGGGCGCAAAATAGATCCTCTGCCGCCCCTCCCTCTCTCTCTCACAAAGGAAAAATAGTGGGGAAGGAAATGGCAGCAATACAAGTAAAATGTAGGTGTGGCGAAGGCAAGTGTCCAGAATGGGCAATAATAGAGGTGCAAGGAGTGGTGGAACCTCGCCCCGAGTTCGAGAACCGTCTTCAAAACCTCCAGATCGGCCGTCTTTGCCGCCCCTCTTCTCAGGTTTTTATTTATTTATTTATTTACTTTCCATTCCATTCTATGATTGATTGGTTTAATGGTTTCAATTTGGTGGGGATAAATGTGCCTGCTGGCAATGAGCCAAGACAATATTCCAGCATCATTACTAGTATGACTATGAATTCTGTGGCCCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123982.p1 GENE.S_Transcript_123982~~S_Transcript_123982.p1 ORF type:5prime_partial len:126 (+),score=9.53 S_Transcript_123982:1-378(+)
RAQNRSSAAPPSLSHKGKIVGKEMAAIQVKCRCGEGKCPEWAIIEVQGVVEPRPEFENRLQNLQIGRLCRPSSQVFIYLFIYFPFHSMIDWFNGFNLVGINVPAGNEPRQYSSIITSMTMNSVAP*

Click here to download the sequence:
Link to NCBI Protein BLAST