Transcript Information: S_Transcript_124004.p1


Annotated TAIR IDAT1G03100.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:744026-746407 | Reverse length=793
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.495367077969
Replicate 219.187509886148
Replicate 319.775372497383
Condition 2: 8 Hour
Replicate 113.895899496971
Replicate 214.779853552955
Replicate 313.147064716363
Condition 3: 24 Hour
Replicate 120.266414489984
Replicate 218.452729167323
Replicate 318.940941733906


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124004.p1 GENE.S_Transcript_124004~~S_Transcript_124004.p1 ORF type:complete len:775 (+),score=156.39,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|0.00058,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|6.2e+02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.63,PPR|PF01535.16|0.00084,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0022,PPR|PF01535.16|45,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|4.3,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|52,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.4e+03 S_Transcript_124004:329-2653(+)
ATGCTGAGAGCAAGGAAGATAAGATGCCAATTTTTGTCTACATTGCTTGGTCACTGCCCCTACTTCATTTCTAGTGTCTTATCACATTCAAAAGGACAAACACTCTGTCAGCCAGCTATTTTCTGCTTAATTAATGGTATTAGATCTATTGCCTCTTTCAGCTATCAGGATCATATAATCAATCAAACACATACCTTTTCAACTGTCGCTGAGACAATCTTGGTTCAGGCTCGTGACCCAGCCAAGCTTAGTTTGGATATACGTAATGCAGTTGATGAGCACAGATACCATGATGCATGGAGATATTTTGAGCAGCACCTGCACATGGAAGGATTTCCTCGGAAGTCTGTTGTAAATAAGTTGCTTACAAGCTTTGCAGAAACCTTGGACTCCAACTTGCTCGAGCAGGCTTTTAAACTGGTGGAACAGGCATTTGAGGAAGGTAAACAGACTTTGTTTGAGAAAGGGACACTTATATATCTTTCTCTAGCACTTGCAAAATGTGGTTTTTCAGTGCCTGCATCGATTCTCTTGAGGAAGTTAGTGGGAATGGAAGAATATCCCCCTGTGACAGCTTGGGCTGCAGTCTTAGCCCACATGTCACAGTCATCTTCTGGAGCTTATCTTGCTGCTGAATTGATTCTTGAGATAGGTTACCTGTTCCAGGATAACAGGGTAGACCCCCGTAAGAAAAGCAATGCTCCCTTGATTGCAATGAAGCCTAACACACTTGCTATAAATGTTGCTTTGGCTGGGTGCCTTCTATTTGGGACTACTAGGATAGCCGAGCAGCTTCTTGACATGAGGCCTAGAATTGGGGTTAAACCTGATGCAACTCTATTAATAATGATGGCACAGATTTATGAAAGGAATGGGCGAAGAGAGGAACTAAAAAACCTGAAGAGATACATAGATGAAGCCCATGACCTTGGGGACATTCAACTTCGGCAATACTGTAATTGCTTGCTCAACTGCCATTTGAAATTTGGGGACCTAGATTCGGCATCTCAGATGGTTTTAGAAATGCTTTGTAAGGCAAAGGAAGCAAAGAATTCTCTTGCTGCAGCCACGTTCATGTTTGAGCCTATTAAAAGACAAAGTTCATCTCCTTCAACGGATATTTCCAGCAGTTTGCAGTCAAATATTTCAGATACGGGTGTGAATCAAGCCAGGCAGTTTATATCTTTTGCAGATTTCTGCAGGGACCGACATTTCATTTATTTGGAGGCAGAGGCAAAAAAAATACTTGGTTCTCTGTCACTGAAATTGCAGAAGGAAACAGATTTGGTGACTACTACACGTGGTATTCTTCAACCAACGGAGAAAACATATGTAAAGTTAACCAAAGCATTTCTGGAATCTGGGAAGATAAAGGAATTGACTGAATTTCTAATCAAGGCAGAGAAGGAAGATTCCCCGGTTTCTGCTGATGATTCAGCCTTGGTTCATGTCACTAATTCATGCATTTCCCTTGGCTGGTTAGATCAAGCTCATGATCTTCTTGATGAGATGCGTTTTCATGGAATTATGACCAGTTCTTCTGTGTACTCCTCCCTTTTAAAAGCATACTGCAAGGTAAATAGGACTCCAGAGGTTATGTCACTTATGCGTGAAGTTCGGAAGATTGGGATTCAGCTGGACGCAAGTTGTTATGAGGCATTAATACAGTCCAGGGTGATACAGAAAGATAATCAAGGTGCCCTAGAACTCTTTAAAGAGATGAAAGAAGCTAAAATACCTAGAGCTGGTCACCAAGAATTCGAGGTTCTGGTGGAGAGTTGTGCGGGGAGTGGTGAAGCAGGATTTATGGCAAAACTTTTGCATGAAATTAAGGAGGGGCAGAGAGTGGATTGTGGAGTCCACGATTGGAACAATGTGATTCATTTCTTCTGTAAGAAAAGATTGATGCCAGATGCTGAGAAGGCTCTGAAGAAAATGAGGAGCTTGGGACATACCCCAAATGCTCAAACTTTCCACTCTATGGTTACTGGTTATGCAGCTATTGGAGGGAAGTATATTGAGGTGGCTGAGCTGTGGGGTGAGATGAAAAGTCTTGCTGCAGCCACACCGATGAAGTTTGATCAAGAACTCTTGGATTCTGTTCTCTACACTTTCGTAAGGGGTGGATTTTTTGCTCGAGCAAATGAGGTTGTGGAGATGATGGAAAAAGGCAAGATGTTCATTGACAAATACAAGTATCGAGCTCTCTTCTTAAAGTACCATAAGACCTTATACAAGGGTAAGACTCCAAAATCCCAAACAGAATCTCAGTTAAGGAAACGAGAAGCAGCATTGACTTTCAAAAAATGGATTGGCTTATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124004.p1 GENE.S_Transcript_124004~~S_Transcript_124004.p1 ORF type:complete len:775 (+),score=156.39,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|0.00058,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.2e+04,PPR_2|PF13041.2|6.2e+02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.63,PPR|PF01535.16|0.00084,PPR|PF01535.16|2.8,PPR|PF01535.16|0.0022,PPR|PF01535.16|45,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|0.96,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|4.3,PPR_1|PF12854.3|4.7e+02,PPR_1|PF12854.3|52,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.4e+03 S_Transcript_124004:329-2653(+)
MLRARKIRCQFLSTLLGHCPYFISSVLSHSKGQTLCQPAIFCLINGIRSIASFSYQDHIINQTHTFSTVAETILVQARDPAKLSLDIRNAVDEHRYHDAWRYFEQHLHMEGFPRKSVVNKLLTSFAETLDSNLLEQAFKLVEQAFEEGKQTLFEKGTLIYLSLALAKCGFSVPASILLRKLVGMEEYPPVTAWAAVLAHMSQSSSGAYLAAELILEIGYLFQDNRVDPRKKSNAPLIAMKPNTLAINVALAGCLLFGTTRIAEQLLDMRPRIGVKPDATLLIMMAQIYERNGRREELKNLKRYIDEAHDLGDIQLRQYCNCLLNCHLKFGDLDSASQMVLEMLCKAKEAKNSLAAATFMFEPIKRQSSSPSTDISSSLQSNISDTGVNQARQFISFADFCRDRHFIYLEAEAKKILGSLSLKLQKETDLVTTTRGILQPTEKTYVKLTKAFLESGKIKELTEFLIKAEKEDSPVSADDSALVHVTNSCISLGWLDQAHDLLDEMRFHGIMTSSSVYSSLLKAYCKVNRTPEVMSLMREVRKIGIQLDASCYEALIQSRVIQKDNQGALELFKEMKEAKIPRAGHQEFEVLVESCAGSGEAGFMAKLLHEIKEGQRVDCGVHDWNNVIHFFCKKRLMPDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGKYIEVAELWGEMKSLAAATPMKFDQELLDSVLYTFVRGGFFARANEVVEMMEKGKMFIDKYKYRALFLKYHKTLYKGKTPKSQTESQLRKREAALTFKKWIGLF*

Click here to download the sequence:
Link to NCBI Protein BLAST