Transcript Information: S_Transcript_124031.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeOrtholog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value3.4E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.295104684511
Replicate 233.890264371853
Replicate 330.135811023203
Condition 2: 8 Hour
Replicate 134.296504015183
Replicate 237.939887641598
Replicate 334.830534488552
Condition 3: 24 Hour
Replicate 134.005952650306
Replicate 231.659241944279
Replicate 335.622887458772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124031.p1 GENE.S_Transcript_124031~~S_Transcript_124031.p1 ORF type:5prime_partial len:194 (+),score=37.39,Vps35|PF03635.13|6.3e-55 S_Transcript_124031:3-584(+)
GAATTTTTCACTCAAGCCTATATCTTATATGAGGAAGAGATATCGGACTCCAGGGAACAGGTGACTGCATTATACCTGATAATAGGGACTCTTCAAAGAATGCATGTATTTGGGGTTGAGAACGGGGATACCTTGACGCACAAAGTCACAGGGTATTCAGCAAAGCTGTTGAAAAAACCTGATCAATGTAGAGCTGTTTACGCATGTTCACATCTCTTTTGGACTGATGATCAGGATGGTGTAAGAGATGGGGAGAGGGTTCTGGTTTGCTTGAAGCGGGCTCTTAAAATTGCAAACGCTGCTCAACAAATGGCCAATGCTACACGGGGAAGTGGTGGATCAGTTATGCTCTTCATTGAAATCCTCAACAAGTATCTCTATTTCTTTGAGAAGGGAAACAACCAGATCACAGTAAATACAATCCAAGACCTGATGGAACTAATCACCACGGAGATGCAAAGTGATAATACTACCACAGATCCAGCGGCTGAAGCTTTCTTTGCCAGCACATTGAGGTACATCCAATTTCAGAAACAAAAAGGTGGTGCAGTCAGTGAAAAATATGAGCTTGTCAAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124031.p1 GENE.S_Transcript_124031~~S_Transcript_124031.p1 ORF type:5prime_partial len:194 (+),score=37.39,Vps35|PF03635.13|6.3e-55 S_Transcript_124031:3-584(+)
EFFTQAYILYEEEISDSREQVTALYLIIGTLQRMHVFGVENGDTLTHKVTGYSAKLLKKPDQCRAVYACSHLFWTDDQDGVRDGERVLVCLKRALKIANAAQQMANATRGSGGSVMLFIEILNKYLYFFEKGNNQITVNTIQDLMELITTEMQSDNTTTDPAAEAFFASTLRYIQFQKQKGGAVSEKYELVKA*

Click here to download the sequence:
Link to NCBI Protein BLAST