Transcript Information: S_Transcript_124258.p3


Annotated TAIR IDAT1G43260.1
Annotated Gene NamehAT transposon superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16318253-16319234 | Forward length=294
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.1045629836849
Replicate 30.34962532859906
Condition 2: 8 Hour
Replicate 10.10106820055513
Replicate 20.10602771867169
Replicate 30.10102297443119
Condition 3: 24 Hour
Replicate 10.31059076052978
Replicate 20.10741142927179
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124258.p3 GENE.S_Transcript_124258~~S_Transcript_124258.p3 ORF type:5prime_partial len:211 (-),score=25.90,DUF659|PF04937.11|2.9e-16 S_Transcript_124258:2564-3196(-)
CAACATGAATTTGATTATTATAGAGAGCAATATAGAGGAAGAGAAAATTATGATGAAGGTGGTGACAGTCGAGCACAACCACACTTTTATCGTTCATCTTCAACGAGAGAAAGTGGTTTGGGAAGGAGGAGTGCAGACAGGTCATACGCGCCTTTATCAAACCCAGCCAGTCGATTGAGGGCCATGGAGACCCTATTAGAAAAGGATGATGTCCACAAAAAACAAAAGAAGCTTACAACGGGTTGGCTGAAAAACGCTAAGAAAAGGCTGGTTAAGGCTTTTGGGGACTTTTTTATTGATAAGAATGTGCCATTTGCGGCCATTGAATCTGACTACACTAATCCCTTGATGAATACGATTAGGGAAGTTGGTCCAAATGTCCGCGCTCCAAGTGCGTATGACTTGTCAGAAGTGTATCTTAAAGAGGAGTATGAGGAGATAAAGACCTTCATCAAATCATTTGAGCAAATATGGAGAGAACGGGGTGTTACAATAATGTGTGATGGTTGGTCAGGTCCCACCCATCTAAACATTATTAATTTTTTGGTTTACTCCCCTCGTGGTACAGTTTCCAGAAATCAGTGGATGCCACCGAAGTTAAGTGCAAGGATGCAAAATTTTATTTTACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124258.p3 GENE.S_Transcript_124258~~S_Transcript_124258.p3 ORF type:5prime_partial len:211 (-),score=25.90,DUF659|PF04937.11|2.9e-16 S_Transcript_124258:2564-3196(-)
QHEFDYYREQYRGRENYDEGGDSRAQPHFYRSSSTRESGLGRRSADRSYAPLSNPASRLRAMETLLEKDDVHKKQKKLTTGWLKNAKKRLVKAFGDFFIDKNVPFAAIESDYTNPLMNTIREVGPNVRAPSAYDLSEVYLKEEYEEIKTFIKSFEQIWRERGVTIMCDGWSGPTHLNIINFLVYSPRGTVSRNQWMPPKLSARMQNFILL*

Click here to download the sequence:
Link to NCBI Protein BLAST