Transcript Information: S_Transcript_124400.p1


Annotated TAIR IDAT5G40450.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16184799-16195513 | Reverse length=2889
E-Value7E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9505349870491
Replicate 23.0502342067865
Replicate 33.1800290567451
Condition 2: 8 Hour
Replicate 14.6625999023479
Replicate 24.3179839898812
Replicate 35.239973411244
Condition 3: 24 Hour
Replicate 12.5874522192743
Replicate 21.8131049261078
Replicate 31.861044053193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124400.p1 GENE.S_Transcript_124400~~S_Transcript_124400.p1 ORF type:3prime_partial len:2575 (+),score=772.67 S_Transcript_124400:173-7894(+)
ATGGCATCAGAAGCTGAATCCTTCGTGACACAGATAACTGAAGAAGGTAATGATAAGCCAGATTGTCCAGAAGCTGGACAGCCAGATCAGGCCGAAGTTATAATCACTCAAATTATTAACCAGAAACAGGACAGTAAGGCTGAAACTTCACAAGAGGCAACAGAGAAGACCTCACAAAAACCAAGCGTAGATACTGACGGCGATGAAAGAGAAAAAGGCGAGGTGTTTATCAATGAAGAAGTTGATAGAGGAGTGCATGTTGGAGAGAAGGTCAGTGAACATATGCAGGAAAAGAAAGAAGATTCAGAAGCACATGTTGCAATATCTGATCACAAAAGTTTGCCCAGGGATCAAGCACGAGACGGTCCAGAATCAGTTCTCAATCAGACTTTGGAGCGCACAAACACAGATGACAAATCCGAAATCAATACGGGTGACCAAGAGAGGTGCATAGAAAGAACACTTCCGAAGGCTATGTTGGCATTGCAAGAAAATTTTGAATCAACAGTTTGTAAAGGACATAAGCTGCAATCCATTGCAGCAGTTGAAGGATCAGAAGAGAAGGTACAAAATGAAAATAAGGAAATCTTGAAAAATAGTAATGAGGAGACCCTGTTTAATGGACTTGCTGATATTGTTGGAGCACAAACTGCAACTTCATTTGTTGATGAGGAAGAGGCTCTCATTAGTCCTAAGAGTAGCAGATTAGAAGAGAAAAAGAGATGCTCACAAGGTGGAATAGATATCGCACTTGGAGGTCCATCGAATTATGCCTTCGAAGAATGTTGCCAAGACACAAGTAAATCATGTGAAAGGGGGAGAGATGAAATAACAGTTGAAAATAAGAAAGTTGAAAGCTATATTGTGCACCAAGAAGCTGTGGACTCGGAAAAAGTGGAAAATAACTCTGCTCTAACATTGATATGCAGAACTGACTTGGAAAAAGTAACCATCAAGGATGTCTTGCACAAAGACAACCAGCAAAACGACAGTCCTAAAAGAGTTGCTCAGAATCCCATAGAAGAAAATTCCTGTATATTGGTATCAGAGGATGAACTATGCTGCCATCAAAAAGGCCAAGGCTTAGCCCGAGTACAAGCTTCCACGGAAAAAGAGATGGATAATGGTGAAAGAAACACTAATAGTTCAGAACTCATGAAAGCTGAGGAATGCATAGAAAAGACAGCAACAAAACTAGATGAAACAGAGAGGGAAATTCTAGAAGAAAATATGGAAATGGTTTCAGAGGAGAATGGGGTAGTCAAAGCAACTGAAGAGGCTGCATTCCCTCGACAAAGTGAAGAAAAATTGGATGTTGTCTCAGGGAATCAAGGGCAGGAAAATGACAGATTGGAAACCGACAACGTTGGGACAACTGGGATTCTACAAGACAAAACCTCTGGGGCTGTCAAAGAAAGGTCTGGCTTTGAAGATATTGATATCTCCCAGAATGAAAATGATTCATCTTTTGAGTACGAAGAAGTCGATTTATCTTTAGGAAAAAAAGATGAAAACAAGGAGGGAAGTTCAAATTTTGAACCAACACAACAAGAGGAACAAGATAATGAAGCTTCATCAGAACAGAAAATTCACAATCAACAAGTTTCTGAAGTAAACAAAAGCACAGAGTCCATAGTTTTAGGCAATTCTGATGAAGAGGAGATAACAAAGAATATGAACTCACCAACAAGCAGAAGACAAGAGGGCAAATCTGCACAATTGCTAAAGTTGGAACCAGAGAGGGGACAAGAGACCAAAGACGCAGAAGGATCAACTGAAAGTGACATACGAAGGAATGAAATCCAGAGGGATCAACATAAATACACAACAATCAGCAATGAAGCGGTATCATCTGAGAAATTAAACTCCCCAGAAATCAAAAAAAATATGACTGCAAATATGGCAGAGGAAGCAGTTGACCTCACTTATCAACAGGACAAAGGTGAAGACTACTTGAACAAAGCTGCATTGAACCTAAGTCAAAATATATGTGAAGAGGGGGATATCATGAACAGATCAAGCAAAGAAGGAACTATGATTGAAGAAACCACAGAGAAGTTGACACACAGTGATCAGAATATTGAACAGATCAAAGAAGAGGACCCAGAGAAAATCATTGCTGAAACAGAGAGCATACCATGTGTCCATACGACTCGCACAACTCAGGCTTCAGAAACCAGCTTGAAGAGCTCAATTTCTACAGAAATGAAACATAAATGCAGCTTTGACCTTCCTCAAGGGTACTCAACAAAAGAATGTAACCGCAGCAGGATGGATGAACCTGACATAGTGGAAGACGATGGCATAATCAATAAAGAACTTCTGGAAAATTCTGAACATAGAGATCAAGATCAGGAGAATTCTATTGACTTTGAAGACACTGGACCAGATATTGATCCCAAAGGCAATATCAACAAAATGAATGCTGATGCTAACATTTCAAATGGCAGACTACAGATTGATGATACAAAGAAAGAAACAACATTGGTACGAGAAATATTTAGACAAGATGACAAAGGATTCAATAACAGAAGTGACATTGTTTCTGCAGGAAAGAATCTTGAACCAGTTGATGCGGTTGAAATGATTGAATGCTGCTTAGAGTCAGCTGCCACCTGTGGGATTAACACATCATCTGCTGAAGCCAACAAACTTGGAACAGAAGAAAGCAGGGATGTGAATATTCTTCTGGAAGAGCATCAAGGTCTGCGTGTCACAGAAGTGAAGGTTGAAGAGGAGGATGAGGATTCCCTGAACAAAGTACAAGGAGACAAGGAAACAAAAAAAACCGTGCTTAATGAGGAAAGTCCTGGTGAAGAAGAAGATATTGGGGAAGATGCTCATGATGTAATGGTAGAAAAAGCAGGTGATACGATCTGCATTGATGAAGAAGTTCATCATGTTACAGGAGACAAAGTAGATGATGAGGATAAATTTGAGAAAGCAAATGCTGATCCTCCTCAGCAACACAGTGATCAGGCCACTATGACTAAATCTGACAACATTGAATATGGAAAAGAACGTGAACAAAATGGGTCTAATGAAATGTATGGAACAAACTCAGTTGAGGAGAAGGAGATAGTGAATCGCATATGTGAAGAGAGCTGTGGTTATGGAAAAGGAAATCAGGAGATCATTAATGAAGCACCTCCCAGCCACAATGAAAACACTAAAATCTGCATGGACAGTATCCAAGTAACTGAAGCAAAGGAAGAATCAGCCCATGACAAACAGCTCAAGAACATAGAAGATGTGGGTCCGGACAACATAAGTGATTGTTTCTCTGCAATAGAGATTACTGATCCAACTGTTCCAGTTGAGAAGCTTGAATGTGGCTCAAAATCAACAAACTTCATAAAACCCGGGAAGGGTGATAGTGAAGTAAGTAGCAGGGATGTGGATGAAGCTGATACCATCTCTGCTGAAAACCTGATCCACAATAGATATGAAGACGCCAAACTTTTGGGCACTAATGAGAACATCATGGCCAACTTTACAATGGAGAAACCAACCGATGCAAATCAGTCTGCAGAGGAACTCCAGTTGATTGAGGAATTTCAAGGCAATGAAAGAACATCCAATGACAAAGATTTCCAGCAAGAAATAACAAGCGAAGGGATAAAAAATGAGGTTAAATATATGGATGCTACTTCGGATCCGTCTCAGCTGGAAAGCAAAAGAACTAGCATGTCAGACAGTATGCAAGTCCAAGAGTATAGAAAAACATATGAACTAGAGAAGTCCAGTGAAATGGATGGATTAGACATGGCGAATGAAAAGGAGCTACTGATTCAAGGATCTGAAGCAGACAAGGCCAGCATTGAAATACCAAATCACCAGATCTCTGAAAGTTTTGAACCACCTGCAAAATCTATAGGCTGGGAAGATCAGTCCCATGAAGAGTCCAAGGATGAGGAAAACGTTATTAAAGTTAACACAGAAGCGGGACTCATGTGTCATGCTCGTGAACACAAACACCTTGAGAACAATCCTAACCGAGTTGATTCAGTTGAAAACCCCGAGTACAGCTCAAAATCTATAGCAGCATCCCAAGGAAGCATAAGTGCAGAAGAAACAGACTCCCAGGTAATATATGTGGACACACCAACTTCAGCAAGTAAAGGAGAAAGCATGATAGCAGATGTCAAGGATATTGTAGCCAAGGAGCCAGATGCATCTCAAGTGGCAATGACATCAGAACAAAGTGCACCAATTGGAAGCCAATCCTGTGAAGATGTCCTTGCCCCCAAATTTGATATTAAAAAAGAAGCAAATATAAAAGAGGAGAAACAGGAAGTAGACTGTTATCAAACAGAAAGTACAACAGAGAGTACGAATGCAGAAATCACTAACAATTTGTTTGAGGAGCCAGGTGCGCCAGTGGCAGCAAAGACTTTGGAAGAATACGATCCATTGGAAAAAATTCAATCATCTGAAGATTCCCTGGGCCCAGAATTGGAAATTCCAAAAGAAGGAATAAATGAAGAAGAAAACTATGGTGAAACAGAAAATAAAACAGATACATCATTTCCCATGGTTGAGTATGATTTATCTGAGGATCCATATACCTTTATTGCAGCAAGCACATCAGAAAAGGACCCCAAATTTGATATTCCAAAAGAGGAAAATGAAGAGGAGAAGCAAGAAATAGACTCTGATGAAACAGCAGAAAAGACAAAATCTGCCACTGCAGAAGCCGGAGATGATGTGTCTAAGAAGCCAGATGCTTCAATTCCAACAGAGAAAATTGAGGATTGTGCACCGTTGGAACAAAATCGATCATCTAAAGATGTCCTTGTTCCCGAACTTGATATTCCAGAAGAAGATACTAAAGAGAAGGAGCAGGAAATAGACCGTGATCAAACAGAAAATATGATAGACACTGTGATTGGAGAAGTGAGGGATCATTTATTTGAGAAGACAAAAGAGACATCAAAAGAATGCAAGCAATCAAAAGACAGCCAACCATCTGAATACATCTTGGGCCAAGAATTGGATATGTCTAAAGAAGGCATCAAAGAGGAGGGGGAAGTCTTTGAAACGGAAAATAAGACAGGAACTGTGAATATTGGAAACGAAAATGATTTACTAGGGAAACGAGGTGCCTTGAGTGCAGCAACATCTGATGAATGCAACCCATCTAAAGAAAGTAGATTGTCTGAAAATATCCTGGCTCCTGAACTTGATATTCCAAAAGATGAGAACAAACAGACAAAGCAGGATGTAAAGACTGGGGAAACAGCCAATGAAACAGAAGCTGTGATTGCAGAAGTTGAAGATGATGTGCCTGAGAAGCCAGCTGCCCCAATTACAGCTAAGACATTTGAGGAATGTCAGCCATTGGAACAAAATCAATCATCTGGAGATGTCATTACCACTGGACATGCAGAACTTGAAGATGATGTGGCCGAGGAGTCGGCGGCTCCAATTACGGCCCGGACATTGGAGGAATGTGAGCCATTGGAACAAAATCAATCACCTGGAGATGTCATTGACACTGAACATGCAGAAGTTGAAGATGATGTGCCCAAGGAGCCATCTGCTCCAATCACAGCTAAGACATTTGAGGAACGTGAGCCATTGGCACAATATGAATCACTTGGAGATGTCATTGCCATTGAACATGAAATTGCAAAAGAAGGAAATTATGAGAAGGAAAAACAGGGTGTAGATTGTAGCCGAACAGAAAATATGACGGGAACTGTGAATGCAGAAGTTGAGGATCAATTTTCTGAAGTGCCAGGCACCTCAACTGCGGGAAAAGCATCAGAAGTTGAGGATCAATTTTCTGAAGTGCCAGGCACCTCAACTGCGGGAAAGGCATCACAAGAATATAAGCAATTATTGGATTGCCCATCTTCCGAAGATGTCCTAGATCAAAAATTTGATATTCCAAAAGAAGCCACTAAGGAGGAGGAGACAGGAGAATGTGGTGAAACAGAAAACAAGACAGAACTTATGAATCCTGAAATCGAGGAGAATTTATCTAAGGAGCCAGGTTACTTGATTGAAGAAAACACACCTGAAGAACGCAACCCAATGGACGAAAGTCAATCATTTGAAGATGTTCAGGGCCATAAATGGAATATCCCAACAGAAGCCATTAAAGAGGAGGAGAAGGGAACAAACAGTAGTGAAACAGAAAATAAGACGAAAGCTGTGAATCTTGAACTAAAGGATGATTTTCTTAAGGAACCATGTTCCTTGATCACAGAGGAGACATCAGCAGCATGCGAGCCATCAGAAGACATTCAATCACCTAAATGTGTCAAGACTCCTGAATTCGACGTTACAAAAGGGGGAATCAAAGAGAATCTGGAAGTAGACTTTGGTGAAACAGAAACGAAAATACAAGTTGCAACTAGAGAAGTGGAGGATGATGTTTCACAAGAGACAGATGCTTTGGTTGCAGACTCTAAAGAATGCACAACAATGGAACCAAGCCAATCATCAGCGAATGTGCTGGTCCCTGACCTTGATCTTCCAAAAGAAGGGGATAAAAAGGAGGTGAAGCCGGGAGTAGATAGCAATCTAACAGAAGATACGAAAGAAAATGTGATTGCTGAAGTAAAGGATGATTTATCTGAGAATGCAGAGAAGACATCAGAAGAAGATACAAAAGAAAATGTGATTGCAGAAGTAAAGGATGATTTATCTGAGAATGCAGAAAAGACATCAGAAGAATGCAAGCAACTAAAAGAAAACCCATCATCTGAAGAGTTCTTGGGCCAAGAACTGAATATTTCAAAAGAAGGCATAAAAAAGGAAGAGAAGGAAGGAGAAGTCTTTGAAACAGAAAATAAGACAGCATCTGAGAAACAAGAAGTTGAGAATGATTTATTTGAGAAGCCAGTTGCCTTGAATGCAGAAAAAAGATCTGAAGAATGCAACACAATAGAAGAAGTTCAATCGTCTAAAAATGTCCTGGCCCCTGAATTTGATATTTTAGAAGAGGACAGCAAACAGAAGAAGCAGCAAGTAAAGATTGGTGAAACAGAGAATGAAACAGAAGCTGAGATTGCAGAAGTTGAGGATGAGATGCCTGAGGATCCAAGTCCTTCAATTACAGCTAAGAAATCTGAGGAATGTGTGACATTGAAAAGAACACAATCTTTAGCTGTTCTGGACCATGAATTTGATACTGCTAAAGAAGGCAATAATGAGGAGGGAAAAAAGGTAGTAGACTGCGGTCAAACAGAAAATATGACAGGAACTGTGAATGAAGAACTCAAGGATGATTTCTCCCAGGTGCTAGGCGCACAAATTGCTGGAAAGGCATATGAAGAATGTGATCCATTAGAGGAAAGCAAATCACCTGAAATTGTCCTTGATCCTGAATTGAATATTTTAGAAGAAGGCGTTAAAGAAGAGGAGATGGGGGGAAACTATGATGAACCAGAAAACAACAAAGAAATTATAAACCCTGAAGTGGAGGATGAAATATCTGAGGAACCAGGTTCCTCGATTGCAACAAACACATCTGAAGAATGTAAGCCATCCGAAGAAACACAATCACTTGAAGATGTTGAGGGCCTTAAATTGAATAACTCAACGGAAGGCATTAAAGAGGAGGAAAAGAAAGGAGACTGTACTGAAACAGCAGATCAGACAGAAACTGAAAATCCCGAACTGAAGGATGATTTATTTGAGGAACCAAGTTCCTTGGTCACAGATAAGACATCAAAGGAATGCGAGCCATCAGAAGACATTCAATCACCTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124400.p1 GENE.S_Transcript_124400~~S_Transcript_124400.p1 ORF type:3prime_partial len:2575 (+),score=772.67 S_Transcript_124400:173-7894(+)
MASEAESFVTQITEEGNDKPDCPEAGQPDQAEVIITQIINQKQDSKAETSQEATEKTSQKPSVDTDGDEREKGEVFINEEVDRGVHVGEKVSEHMQEKKEDSEAHVAISDHKSLPRDQARDGPESVLNQTLERTNTDDKSEINTGDQERCIERTLPKAMLALQENFESTVCKGHKLQSIAAVEGSEEKVQNENKEILKNSNEETLFNGLADIVGAQTATSFVDEEEALISPKSSRLEEKKRCSQGGIDIALGGPSNYAFEECCQDTSKSCERGRDEITVENKKVESYIVHQEAVDSEKVENNSALTLICRTDLEKVTIKDVLHKDNQQNDSPKRVAQNPIEENSCILVSEDELCCHQKGQGLARVQASTEKEMDNGERNTNSSELMKAEECIEKTATKLDETEREILEENMEMVSEENGVVKATEEAAFPRQSEEKLDVVSGNQGQENDRLETDNVGTTGILQDKTSGAVKERSGFEDIDISQNENDSSFEYEEVDLSLGKKDENKEGSSNFEPTQQEEQDNEASSEQKIHNQQVSEVNKSTESIVLGNSDEEEITKNMNSPTSRRQEGKSAQLLKLEPERGQETKDAEGSTESDIRRNEIQRDQHKYTTISNEAVSSEKLNSPEIKKNMTANMAEEAVDLTYQQDKGEDYLNKAALNLSQNICEEGDIMNRSSKEGTMIEETTEKLTHSDQNIEQIKEEDPEKIIAETESIPCVHTTRTTQASETSLKSSISTEMKHKCSFDLPQGYSTKECNRSRMDEPDIVEDDGIINKELLENSEHRDQDQENSIDFEDTGPDIDPKGNINKMNADANISNGRLQIDDTKKETTLVREIFRQDDKGFNNRSDIVSAGKNLEPVDAVEMIECCLESAATCGINTSSAEANKLGTEESRDVNILLEEHQGLRVTEVKVEEEDEDSLNKVQGDKETKKTVLNEESPGEEEDIGEDAHDVMVEKAGDTICIDEEVHHVTGDKVDDEDKFEKANADPPQQHSDQATMTKSDNIEYGKEREQNGSNEMYGTNSVEEKEIVNRICEESCGYGKGNQEIINEAPPSHNENTKICMDSIQVTEAKEESAHDKQLKNIEDVGPDNISDCFSAIEITDPTVPVEKLECGSKSTNFIKPGKGDSEVSSRDVDEADTISAENLIHNRYEDAKLLGTNENIMANFTMEKPTDANQSAEELQLIEEFQGNERTSNDKDFQQEITSEGIKNEVKYMDATSDPSQLESKRTSMSDSMQVQEYRKTYELEKSSEMDGLDMANEKELLIQGSEADKASIEIPNHQISESFEPPAKSIGWEDQSHEESKDEENVIKVNTEAGLMCHAREHKHLENNPNRVDSVENPEYSSKSIAASQGSISAEETDSQVIYVDTPTSASKGESMIADVKDIVAKEPDASQVAMTSEQSAPIGSQSCEDVLAPKFDIKKEANIKEEKQEVDCYQTESTTESTNAEITNNLFEEPGAPVAAKTLEEYDPLEKIQSSEDSLGPELEIPKEGINEEENYGETENKTDTSFPMVEYDLSEDPYTFIAASTSEKDPKFDIPKEENEEEKQEIDSDETAEKTKSATAEAGDDVSKKPDASIPTEKIEDCAPLEQNRSSKDVLVPELDIPEEDTKEKEQEIDRDQTENMIDTVIGEVRDHLFEKTKETSKECKQSKDSQPSEYILGQELDMSKEGIKEEGEVFETENKTGTVNIGNENDLLGKRGALSAATSDECNPSKESRLSENILAPELDIPKDENKQTKQDVKTGETANETEAVIAEVEDDVPEKPAAPITAKTFEECQPLEQNQSSGDVITTGHAELEDDVAEESAAPITARTLEECEPLEQNQSPGDVIDTEHAEVEDDVPKEPSAPITAKTFEEREPLAQYESLGDVIAIEHEIAKEGNYEKEKQGVDCSRTENMTGTVNAEVEDQFSEVPGTSTAGKASEVEDQFSEVPGTSTAGKASQEYKQLLDCPSSEDVLDQKFDIPKEATKEEETGECGETENKTELMNPEIEENLSKEPGYLIEENTPEERNPMDESQSFEDVQGHKWNIPTEAIKEEEKGTNSSETENKTKAVNLELKDDFLKEPCSLITEETSAACEPSEDIQSPKCVKTPEFDVTKGGIKENLEVDFGETETKIQVATREVEDDVSQETDALVADSKECTTMEPSQSSANVLVPDLDLPKEGDKKEVKPGVDSNLTEDTKENVIAEVKDDLSENAEKTSEEDTKENVIAEVKDDLSENAEKTSEECKQLKENPSSEEFLGQELNISKEGIKKEEKEGEVFETENKTASEKQEVENDLFEKPVALNAEKRSEECNTIEEVQSSKNVLAPEFDILEEDSKQKKQQVKIGETENETEAEIAEVEDEMPEDPSPSITAKKSEECVTLKRTQSLAVLDHEFDTAKEGNNEEGKKVVDCGQTENMTGTVNEELKDDFSQVLGAQIAGKAYEECDPLEESKSPEIVLDPELNILEEGVKEEEMGGNYDEPENNKEIINPEVEDEISEEPGSSIATNTSEECKPSEETQSLEDVEGLKLNNSTEGIKEEEKKGDCTETADQTETENPELKDDLFEEPSSLVTDKTSKECEPSEDIQSPK

Click here to download the sequence:
Link to NCBI Protein BLAST