Transcript Information: S_Transcript_12444.p1


Annotated TAIR IDAT5G60030.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24172082-24172960 | Reverse length=292
E-Value1.7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7494798581415
Replicate 24.6341932403912
Replicate 35.5580848471125
Condition 2: 8 Hour
Replicate 16.6215823815755
Replicate 27.0486646399139
Replicate 36.8132846225968
Condition 3: 24 Hour
Replicate 14.7879196691713
Replicate 24.8639230323668
Replicate 35.6432884742041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12444.p1 GENE.S_Transcript_12444~~S_Transcript_12444.p1 ORF type:complete len:219 (+),score=68.91 S_Transcript_12444:241-897(+)
ATGAAGACGGTGTCGGGGACAGTAGTATCGTCGAAGCCGGTATCTCTTTCAAAAGCAGCAAGAATTCTCTCGAAGTTTGTAGGTTCTGACAATTGTGCTTCCCCTTCATATCTTGCTTATTTGAGGCGTGCTTCAGAGTCGTTTGATGAGCTCGTTCAGGTCCACAAAGAGCTTAAAGGGACCAGAGGGTCCGAGCTCAAAGGTAAGAAGACAAAGACGAAGCATAATGCTTCTTCCAGTGCTGTTTTGAATGAGGAGATTATTAGTCCTGTTGGTAAAAAAGAAGAATACGGTTTTTTAGCTGATGAGAGTAGTAGTAAGAGGGGTGAAAAAGAGAGCAAGAGGAGTGATGGAGTAGTAAATGGAAAAGTCGAGGAGAAAAAGAAGAAAAAAGGGAAAGATGAGAAGGATGGGGATCGAAACAAAAATGATGAAATTAGGTTTAGTGATAGTGTTAGTAACCAGGTTAAAAGTGAGCCAAATGAGGGTGGTGGTAAAGGGAAGAAGCATAAGAGGGAACAAAAACATCAAGTGGCCGAAGTAAAAGTTGAGATCAAGGAAGAAAATGTGAAAGAGAGTAGGAAGCGGAAGCATGATGATTCAGTGGAGAAGCCCAAGTCGAAGAAATTGAAAAAAACTGCAGCAAGGGCCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12444.p1 GENE.S_Transcript_12444~~S_Transcript_12444.p1 ORF type:complete len:219 (+),score=68.91 S_Transcript_12444:241-897(+)
MKTVSGTVVSSKPVSLSKAARILSKFVGSDNCASPSYLAYLRRASESFDELVQVHKELKGTRGSELKGKKTKTKHNASSSAVLNEEIISPVGKKEEYGFLADESSSKRGEKESKRSDGVVNGKVEEKKKKKGKDEKDGDRNKNDEIRFSDSVSNQVKSEPNEGGGKGKKHKREQKHQVAEVKVEIKEENVKESRKRKHDDSVEKPKSKKLKKTAARAF*

Click here to download the sequence:
Link to NCBI Protein BLAST