Transcript Information: S_Transcript_124450.p1


Annotated TAIR IDAT3G12760.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4054963-4056826 | Forward length=250
E-Value1.9E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1496178153007
Replicate 210.547947198812
Replicate 39.9193998856019
Condition 2: 8 Hour
Replicate 111.639754874292
Replicate 23.9217583272827
Replicate 310.870233041584
Condition 3: 24 Hour
Replicate 19.3123606912095
Replicate 29.7517595627312
Replicate 310.14910950166


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124450.p1 GENE.S_Transcript_124450~~S_Transcript_124450.p1 ORF type:complete len:251 (+),score=55.55,Cullin_binding|PF03556.11|2.4e-36,UBA_4|PF14555.2|2.3e-12 S_Transcript_124450:228-980(+)
ATGAACAAGCTGGGGAGAGGACATCGAGACAAATTGCAGCAGTTTATGGCAATAACTGGTTCCAGCGAAAAAGTTGCTCTTCAGGCGTTAAAGAGTAGTGACTGGCACCTTGAGGGAGCATTTGATGTATTTTACAGTCAGCCTCAAACTAAATCATATACTGATACTAAGCATCTGGAGGAGCTGTACAACAGATACAAGGATCAATATGCTGACATGATAATGGTGGATGGTATTACTCTCCTATGCAATGACCTCCAGGTTGATCCCCAGGATATTGTAATGTTGGTTATCTCCTGGCACATGAAGGCTGCAACAATGTGTGAATTCTCAAAGCAAGAATTCATTGGTGGTTTGCAAGCAATAGGGGTTGATTCTCTCGAGAAGTTTCGTGAGAGGATACCGTACATGCGCTCTGAGCTGAAAGATGAACAAAAGTTTCGTGATATATACATCTTTGCTTTTGGGTGGGCTAAGGAAAAGGGTCAGAAGTCTTTGGCATTGGATACAGCTATTGGGATGTGGCAGCTACTATTTGCTGAGAAACAGTGGCCTTTAATTGATCACTGGTGTGAGTTTTTGCAGGCTCGGCATAATAAAGCTATATCAAGAGACACCTGGGCTCAACTTCTGGAATTTGTTAGGACAGTTGATCCACAACTCTCTAATTATGATGCAGAAGGTGCCTGGCCTTATCTCATCGATGAATTCGTTGAATACTTGTATGAGAATGGTGTCATCCCACGAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124450.p1 GENE.S_Transcript_124450~~S_Transcript_124450.p1 ORF type:complete len:251 (+),score=55.55,Cullin_binding|PF03556.11|2.4e-36,UBA_4|PF14555.2|2.3e-12 S_Transcript_124450:228-980(+)
MNKLGRGHRDKLQQFMAITGSSEKVALQALKSSDWHLEGAFDVFYSQPQTKSYTDTKHLEELYNRYKDQYADMIMVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGLQAIGVDSLEKFRERIPYMRSELKDEQKFRDIYIFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLIDHWCEFLQARHNKAISRDTWAQLLEFVRTVDPQLSNYDAEGAWPYLIDEFVEYLYENGVIPRG*

Click here to download the sequence:
Link to NCBI Protein BLAST