Transcript Information: S_Transcript_124452.p1


Annotated TAIR IDAT3G12760.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4054963-4056826 | Forward length=250
E-Value6.4E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.636377336642
Replicate 217.913365833395
Replicate 316.666142240685
Condition 2: 8 Hour
Replicate 124.260077058023
Replicate 227.092513949027
Replicate 317.89357849409
Condition 3: 24 Hour
Replicate 123.347971804167
Replicate 217.985501847285
Replicate 322.561003022925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124452.p1 GENE.S_Transcript_124452~~S_Transcript_124452.p1 ORF type:complete len:218 (+),score=41.66,Cullin_binding|PF03556.11|5.7e+03,Cullin_binding|PF03556.11|1.7e-36 S_Transcript_124452:352-1005(+)
ATGTATTTTACAGTCAGCCTCAAACTAAATCATATACTGATACTAAGCATCTGGAGGAGCTGTACAACAGATACAAGGTGTAGTTCTTGGACATGTGTTGCAGATCAATATGCTGACATGATAATGGTGGATGGTATTACTCTCCTATGCAATGACCTCCAGGTTGATCCCCAGGATATTGTAATGTTGGTTATCTCCTGGCACATGAAGGCTGCAACAATGTGTGAATTCTCAAAGCAAGAATTCATTGGTGGTTTGCAAGCAATAGGGGTTGATTCTCTCGAGAAGTTTCGTGAGAGGATACCGTACATGCGCTCTGAGCTGAAAGATGAACAAAAGTTTCGTGATATATACATCTTTGCTTTTGGGTGGGCTAAGGAAAAGGGTCAGAAGTCTTTGGCATTGGATACAGCTATTGGGATGTGGCAGCTACTATTTGCTGAGAAACAGTGGCCTTTAATTGATCACTGGTGTGAGTTTTTGCAGGCTCGGCATAATAAAGCTATATCAAGAGACACCTGGGCTCAACTTCTGGAATTTGTTAGGACAGTTGATCCACAACTCTCTAATTATGATGCAGAAGGTGCCTGGCCTTATCTCATCGATGAATTCGTTGAATACTTGTATGAGAATGGTGTCATCCCACGAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124452.p1 GENE.S_Transcript_124452~~S_Transcript_124452.p1 ORF type:complete len:218 (+),score=41.66,Cullin_binding|PF03556.11|5.7e+03,Cullin_binding|PF03556.11|1.7e-36 S_Transcript_124452:352-1005(+)
MYFTVSLKLNHILILSIWRSCTTDTRCSSWTCVADQYADMIMVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGLQAIGVDSLEKFRERIPYMRSELKDEQKFRDIYIFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLIDHWCEFLQARHNKAISRDTWAQLLEFVRTVDPQLSNYDAEGAWPYLIDEFVEYLYENGVIPRG*

Click here to download the sequence:
Link to NCBI Protein BLAST