Transcript Information: S_Transcript_124455.p1


Annotated TAIR IDAT3G12760.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4054963-4056826 | Forward length=250
E-Value3.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.368660721825
Replicate 212.423706741125
Replicate 313.787288140167
Condition 2: 8 Hour
Replicate 110.766216470786
Replicate 214.335359322543
Replicate 313.244798511833
Condition 3: 24 Hour
Replicate 115.270209818668
Replicate 217.382923442053
Replicate 316.161698356676


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124455.p1 GENE.S_Transcript_124455~~S_Transcript_124455.p1 ORF type:complete len:103 (+),score=19.63,UBA_4|PF14555.2|4.5e-13 S_Transcript_124455:228-536(+)
ATGAACAAGCTGGGGAGAGGACATCGAGACAAATTGCAGCAGTTTATGGCAATAACTGGTTCCAGCGAAAAAGTTGCTCTTCAGGCGTTAAAGAGTAGTGACTGGCACCTTGAGGGAGCATTTGATGTATTTTACAGTCAGCCTCAAACTAAATCATATACTGATACTAAGCATCTGGAGGAGCTGTACAACAGATACAAGGATCAATATGCTGACATGATAATGGTGGATGGTATTACTCTCCTATGCAATGACCTCCAGGTTGATCCCCAAGATATTGTAATGGAGCTGGATTCCTTCTGCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124455.p1 GENE.S_Transcript_124455~~S_Transcript_124455.p1 ORF type:complete len:103 (+),score=19.63,UBA_4|PF14555.2|4.5e-13 S_Transcript_124455:228-536(+)
MNKLGRGHRDKLQQFMAITGSSEKVALQALKSSDWHLEGAFDVFYSQPQTKSYTDTKHLEELYNRYKDQYADMIMVDGITLLCNDLQVDPQDIVMELDSFCF*

Click here to download the sequence:
Link to NCBI Protein BLAST