Transcript Information: S_Transcript_124459.p1


Annotated TAIR IDAT3G12760.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4054963-4056826 | Forward length=250
E-Value3.1E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6552627624759
Replicate 24.5044862013259
Replicate 34.0727708851285
Condition 2: 8 Hour
Replicate 15.4202033722713
Replicate 23.9150735119522
Replicate 35.4177779329328
Condition 3: 24 Hour
Replicate 15.552241220526
Replicate 23.2107066399826
Replicate 35.3596844360872


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124459.p1 GENE.S_Transcript_124459~~S_Transcript_124459.p1 ORF type:complete len:240 (+),score=47.23,Cullin_binding|PF03556.11|4.1e-23,UBA_4|PF14555.2|2.1e-12 S_Transcript_124459:228-947(+)
ATGAACAAGCTGGGGAGAGGACATCGAGACAAATTGCAGCAGTTTATGGCAATAACTGGTTCCAGCGAAAAAGTTGCTCTTCAGGCGTTAAAGAGTAGTGACTGGCACCTTGAGGGAGCATTTGATGTATTTTACAGTCAGCCTCAAACTAAATCATATACTGATACTAAGCATCTGGAGGAGCTGTACAACAGATACAAGGATCAATATGCTGACATGATAATGGTGGATGGTATTACTCTCCTATGCAATGACCTCCAGGTTGATCCCCAGGATATTGTAATGTTGGTTATCTCCTGGCACATGAAGGCTGCAACAATGTGTGAATTCTCAAAGCAAGAATTCATTGGTGGTTTGCAAGCAATAGGGGTTGATTCTCTCGAGAAGTTTCGTGAGAGGATACCGTACATGCGCTCTGAGCTGAAAGATGAACAAAAGTTTCGTGATATATACATCTTTGCTTTTGGGTGGGCTAAGGAAAAGGGTCAGAAGTCTTTGGCATTGGATACAGCTATTGGGATGTGGCAGCTACTATTTGCTGAGAAACAGTGGCCTTTAATTGATCACTGGTGTGAGTTTTTGCAGGCTCGGCATAATAAAGCTATATCAAGAGACACCTGGGCTCAACTTCTGGAATTTGTTAGGGTAAGAGTCTTCTTTGGGTGTGCACTTGTGCAAGTCTTATACCTTGCTTTCTGCAAGACTCGATTGTCCGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124459.p1 GENE.S_Transcript_124459~~S_Transcript_124459.p1 ORF type:complete len:240 (+),score=47.23,Cullin_binding|PF03556.11|4.1e-23,UBA_4|PF14555.2|2.1e-12 S_Transcript_124459:228-947(+)
MNKLGRGHRDKLQQFMAITGSSEKVALQALKSSDWHLEGAFDVFYSQPQTKSYTDTKHLEELYNRYKDQYADMIMVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGLQAIGVDSLEKFRERIPYMRSELKDEQKFRDIYIFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLIDHWCEFLQARHNKAISRDTWAQLLEFVRVRVFFGCALVQVLYLAFCKTRLSV*

Click here to download the sequence:
Link to NCBI Protein BLAST