Transcript Information: S_Transcript_12446.p1


Annotated TAIR IDAT5G60030.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24172082-24172960 | Reverse length=292
E-Value8E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.415375669056
Replicate 213.891386017695
Replicate 315.881244960878
Condition 2: 8 Hour
Replicate 110.563966499691
Replicate 211.289497693195
Replicate 310.065816924575
Condition 3: 24 Hour
Replicate 110.821308025433
Replicate 29.2334047162897
Replicate 310.042110272407


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12446.p1 GENE.S_Transcript_12446~~S_Transcript_12446.p1 ORF type:complete len:216 (+),score=69.22 S_Transcript_12446:241-888(+)
ATGAAGACGGTGTCGGGGACAGTAGTATCGTCGAAGCCGGTATCTCTTTCAAAAGCAGCAAGAATTCTCTCGAAGTTTGTAGGTTCTGACAATTGTGCTTCCCCTTCATATCTTGCTTATTTGAGGCGTGCTTCAGAGTCGTTTGATGAGCTCGTTCAGGTCCACAAAGAGCTTAAAGGGACCAGAGGGTCCGAGCTCAAAGGTAAGAAGACAAAGACGAAGCATAATGCTTCTTCCAGTGCTGTTTTGAATGAGGAGATTATTAGTCCTGTTGGTAAAAAAGAAGAAGACGGTTTTTTAGCTGGTGAGAGTAGTAAGAGGGGTGAAAAAGAGAGCAAGAGGAGTGATGGGGTAGTAAATGGAAAAGTTGTGGAGAAGAAGAAGAAAAAGGGGAAAGATGAGAAGGAAAGGGATCGAAACGACGATGATGAAATTAGGTTTAGTGCTAGTGTTAGTAACCAGGTTAAAAGTGAGCCAAATGAGGGTGGTGGTAAAGGGAAGAAGCATAAGAGGGAACAAAGACATCAAGTGGCCCAAGTAAAAGTTGAGATAAAGGAAGAAAATGCGAAAGAGAGTAGGAAGCGGAAGCATGATGATTCAGTGGAGAAGCCCAAGTCGAAGAAATTGAAAAAAACTGCAGCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12446.p1 GENE.S_Transcript_12446~~S_Transcript_12446.p1 ORF type:complete len:216 (+),score=69.22 S_Transcript_12446:241-888(+)
MKTVSGTVVSSKPVSLSKAARILSKFVGSDNCASPSYLAYLRRASESFDELVQVHKELKGTRGSELKGKKTKTKHNASSSAVLNEEIISPVGKKEEDGFLAGESSKRGEKESKRSDGVVNGKVVEKKKKKGKDEKERDRNDDDEIRFSASVSNQVKSEPNEGGGKGKKHKREQRHQVAQVKVEIKEENAKESRKRKHDDSVEKPKSKKLKKTAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST