Transcript Information: S_Transcript_12450.p1


Annotated TAIR IDAT2G07050.1
Annotated Gene Namecycloartenol synthase 1
Annotated Gene Symbol(s)CAS1
Annotation TypeOrtholog
Chromosome Positionchr2:2924629-2930295 | Forward length=759
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.321716228029
Replicate 289.072806944615
Replicate 393.663661048024
Condition 2: 8 Hour
Replicate 177.183205782285
Replicate 280.908947770156
Replicate 376.737051377933
Condition 3: 24 Hour
Replicate 1108.07944424933
Replicate 296.938592687246
Replicate 3111.74235397136


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12450.p1 GENE.S_Transcript_12450~~S_Transcript_12450.p1 ORF type:3prime_partial len:725 (+),score=132.98,SQHop_cyclase_C|PF13243.2|5.4e-05,SQHop_cyclase_C|PF13243.2|2.6e-44,SQHop_cyclase_N|PF13249.2|8.8e-38,SQHop_cyclase_N|PF13249.2|88,SQHop_cyclase_N|PF13249.2|29,SQHop_cyclase_N|PF13249.2|8.9,Prenyltrans|PF00432.17|2.6e+02,Prenyltrans|PF00432.17|2e-08,Prenyltrans|PF00432.17|26,Prenyltrans|PF00432.17|7.9e-11,Prenyltrans|PF00432.17|1.8e-09,Prenyltrans|PF00432.17|7.3e+03 S_Transcript_12450:504-2675(+)
ATGTGGAAGTTGAAGATAGCAGAAGGTGGTAGCCCATGGTTAAGAACCACAAACAATCATGTCGGAAGACAAACCTGGGAGTTTGACCCTAATTTTGGAACTCCTGAGGAGATTAGAGAGGTTGAGGAGGCTCGTGAGAACTTTCACGAGCATCGCTTCGAGAAGAAGCATAGTTCAGATTTGCTCATGCGGATTCAGTTTGGGAGGGAGAATCCATGCAATGTGGCCTTACCTCAAGTCAAAATAGAAAATGAGAGTGATGTAACAGAAGAAGCTGTTGCCACCACTCTGAGAAGGGCAATCATCTATCATTCCACTCTTCAGGCACATGATGGACACTGGCCTGGGGATTATGGTGGTCCCATGTTCCTTATGCCTGGCTTGGTAATTGCCTTGTCTGTTTCTGGGGCACTAAATGCAGTCTTGTCACAAGAGCATCAGCACGAGATTCGCCGCTACCTCTATAACCATCAGAATAAAGATGGTGGATGGGGTTTGCACATTGAGGGGCATAGTACCATGTTTGGTACTGTTTTAACTTATATTACTTCAAGGTTGCTTGGTGAAGGGATGAATGATGGTGATGAAGCAATGGAGAAAGGGCGTAAATGGATTTTGGAGCATGGAAGTGCCACTGCAATAACATCATGGGGGAAATTGTGGCTTTCAGTACTTGGAGCATTCGAATGGGATGGCAATAATCCACTGCCTCCAGAAATATGGCTGTTGCCATATATACTTCCCATTCATCCAGGAAGAATGTGGTGTCACTGTCGCATGGTTTATTTGCCTATGTCGTACTTGTATGGAAAGAGGTTTGTGGGTCCTATCACACCAACTGTTTTGTCGTTGCGGAAGGAGCTGTACAATGTCCCATATCATGAAGTAGATTGGGATAAGGCGCGGAATGAATGTGCAAAGGAAGATTTATACTATCCTCACCCCTTAGTTCAGGATGTACTTTGGGCATCTCTTCACAAGGTTGCTGAGCCTCTCTTAATGCGATGGCCAGCTAAAAGGTTGAGAGAAAAGGCCCTTTCTACTGTGATGGAACACATACACTATGAAGATGAGAATACTCGATATATATGCATTGGTCCTGTGAACAAGGTGCTAAATATGCTCTGTTGTTGGGTGGAAGATCCTAATTCAGAGGCTTTCAAGCTACATATTCCTCGAATTTATGATTATCTTTGGATTGCTGAAGATGGCATGAAAATGCAGGGTTACAATGGCAGTCAATTATGGGACACTGCTTTTGCTGTGCAAGCAATACTTGCCACCAATCTTGTAGAAGAATATGGACAGACTGTTAAGAAAGCACATTCATTTATAAAAAACTCGCAGGTTTTGCTAGATTGCCCAGGTGATCTGAGTTATTGGTACCGCCATATCTCTAAAGGTGCTTGGCCATTCTCTACTGCGGATCACGGTTGGCCCATTTCAGATTGTACTGCAGAAGGATTGAAAGCTGTTCTTTCATTGTCCAAAATTCCGTCAGAAATTGTTGGTGAGCCACTGGAAGTTAACCGTTTGTATGATGCCGTAAATGTAATCCTATCCCTACAGAATGTTGATGGAGGATTTGCAACGTATGAGCTCACACGATCCTACCTTTGGCTAGAGATTATTAACCCAGCTGAAACATTTGGCGATATTGTCATTGATTATCCCTATGTCGAGTGTACCTCAGCCTCAATCCAAGCCCTAGAATCATTTAGAAGATTATATCCTGGTCATAGGAGAGACGAGATAGAGGATTGTATCAATCGAGCTGTGAGGTTCATCGAAAAGATACAAGCAGCAGATGGTTCATGGTATGGTTCCTGGGGAGTCTGCTTCACATATGGTACATGGTTTGGAGTGAAGGGTTTGGTTGCTGCTGGAAAGACCTATGATAACTGCACGAGCATCCAGAAAGCCTGTGCATTTCTGTTGTCGAAACAGCTTGATTGTGGTGGCTGGGGAGAGAGTTACCTTTCATGTCAAAACAAGGTGTATTCGCATATTGAAGGGAACAAAGGTCATGTAGTCAACACAGGATGGGCCATGCTGGGTCTTATTGGAGCTGGACAGGCTGATAGAGATCCATTGCCATTGCACCGTGGTGCTAGATTTCTAATCAATTCCCAAATGCAAAATGGAGATTTTCCGCAACAGGAGATAATGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12450.p1 GENE.S_Transcript_12450~~S_Transcript_12450.p1 ORF type:3prime_partial len:725 (+),score=132.98,SQHop_cyclase_C|PF13243.2|5.4e-05,SQHop_cyclase_C|PF13243.2|2.6e-44,SQHop_cyclase_N|PF13249.2|8.8e-38,SQHop_cyclase_N|PF13249.2|88,SQHop_cyclase_N|PF13249.2|29,SQHop_cyclase_N|PF13249.2|8.9,Prenyltrans|PF00432.17|2.6e+02,Prenyltrans|PF00432.17|2e-08,Prenyltrans|PF00432.17|26,Prenyltrans|PF00432.17|7.9e-11,Prenyltrans|PF00432.17|1.8e-09,Prenyltrans|PF00432.17|7.3e+03 S_Transcript_12450:504-2675(+)
MWKLKIAEGGSPWLRTTNNHVGRQTWEFDPNFGTPEEIREVEEARENFHEHRFEKKHSSDLLMRIQFGRENPCNVALPQVKIENESDVTEEAVATTLRRAIIYHSTLQAHDGHWPGDYGGPMFLMPGLVIALSVSGALNAVLSQEHQHEIRRYLYNHQNKDGGWGLHIEGHSTMFGTVLTYITSRLLGEGMNDGDEAMEKGRKWILEHGSATAITSWGKLWLSVLGAFEWDGNNPLPPEIWLLPYILPIHPGRMWCHCRMVYLPMSYLYGKRFVGPITPTVLSLRKELYNVPYHEVDWDKARNECAKEDLYYPHPLVQDVLWASLHKVAEPLLMRWPAKRLREKALSTVMEHIHYEDENTRYICIGPVNKVLNMLCCWVEDPNSEAFKLHIPRIYDYLWIAEDGMKMQGYNGSQLWDTAFAVQAILATNLVEEYGQTVKKAHSFIKNSQVLLDCPGDLSYWYRHISKGAWPFSTADHGWPISDCTAEGLKAVLSLSKIPSEIVGEPLEVNRLYDAVNVILSLQNVDGGFATYELTRSYLWLEIINPAETFGDIVIDYPYVECTSASIQALESFRRLYPGHRRDEIEDCINRAVRFIEKIQAADGSWYGSWGVCFTYGTWFGVKGLVAAGKTYDNCTSIQKACAFLLSKQLDCGGWGESYLSCQNKVYSHIEGNKGHVVNTGWAMLGLIGAGQADRDPLPLHRGARFLINSQMQNGDFPQQEIMG

Click here to download the sequence:
Link to NCBI Protein BLAST