Transcript Information: S_Transcript_12454.p1


Annotated TAIR IDAT5G54930.1
Annotated Gene NameAT hook motif-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22305897-22306839 | Reverse length=286
E-Value2.3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.204132882024
Replicate 235.571823805298
Replicate 334.173305096083
Condition 2: 8 Hour
Replicate 131.702986674668
Replicate 225.901097489309
Replicate 324.9634792807
Condition 3: 24 Hour
Replicate 139.309108527192
Replicate 238.358804085101
Replicate 334.663451401684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12454.p1 GENE.S_Transcript_12454~~S_Transcript_12454.p1 ORF type:complete len:374 (+),score=96.08 S_Transcript_12454:547-1668(+)
ATGAATCACCAGCAGCAAGTCGGTGACCCCTTTCAACCACCAGGCATTCCTTTGAAGAGAAAGCGAGGTCGTCCTCGGAAAGATCGAAGCCAGAACCCCAGCAATAGCCCTTTTATGCTTCCTAAGAAGGATCAGAGCCAACCCCGTGCTGAAAATGCTCCTGTTCCTCCTGGCTTTGAAAGATCAAATGGGAATGAGTCACATACTGTAGATACAACTAATGAAAATAATGAAGATTCCATGGTAGGCCAGGTAGTTACAGGTGTAATTGAGGCAGCATTTGAAGCTGGGTATTTACTCTCGGTTCGTGTTGGTGACTCAGAAGCTAGTTTGAGGGGTGTTGTATTCAAGCCAGGACATTATGTTCCTGTTTCAGCTGAAAATGATGTGGCCCCTAGTTTGCAAATGATCCGAAGAAATGAGGTGCCTTTCCCATCTGGAAACCCAGGCCACAAACGTCGAGGCAGAGAGCGCAAGCAGCACCATTCTCCACACCAATCAAATGGTTCGCCGCCTTCTAACCAGTTGGCCAAGTTCCGAGCCAAACCGATGCCTATAGTGGCAGTTCAATCTCCCCATCCTGTGGGTGCTAGAGGGACAGTGGTGCCAGTTGTTCTTCAACCTATCAACTTATCAAACGGTGCAACTCCAGCCATGGAAGCACCTCGTATGGCATCACAACCTGCTCACTTGGCCGCCTGCAAAAACAAACCACTACCTGTAGCACAAGCTGCCCAGGAGGCTGTGCCTAAGAGCTCAGAGGGAGATAGTGGTTCTGGTTCTCAACCTTTTGAAGAGCTGGTCAGTGCTGCTAAGAGGATGCAGGGGTCTCCAGGTTCCAGTGAAACTCAGAATGAGAGCGGTACATCATCTAGCAAGATGCTACCAAAAGATTCCGGTCTTACCCCTGAACAGGTCGAGGACTTGAGCAAGCCTCTGACGGTGAAGCCCCTCCAAGCCATTCGATCAGGGTTCCCAGATCCTTCTGCACCAATGTCCCATACTTTCCCGGAGAGGAGAGCAGGGAAGATGACCGAGTTACTTTTGGCTGTGCAAGAAAATTTGAGGGAGAGACAGATGGCCGAGAGTCAGCATCCGGACTTCCAGAGCCCAGGAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12454.p1 GENE.S_Transcript_12454~~S_Transcript_12454.p1 ORF type:complete len:374 (+),score=96.08 S_Transcript_12454:547-1668(+)
MNHQQQVGDPFQPPGIPLKRKRGRPRKDRSQNPSNSPFMLPKKDQSQPRAENAPVPPGFERSNGNESHTVDTTNENNEDSMVGQVVTGVIEAAFEAGYLLSVRVGDSEASLRGVVFKPGHYVPVSAENDVAPSLQMIRRNEVPFPSGNPGHKRRGRERKQHHSPHQSNGSPPSNQLAKFRAKPMPIVAVQSPHPVGARGTVVPVVLQPINLSNGATPAMEAPRMASQPAHLAACKNKPLPVAQAAQEAVPKSSEGDSGSGSQPFEELVSAAKRMQGSPGSSETQNESGTSSSKMLPKDSGLTPEQVEDLSKPLTVKPLQAIRSGFPDPSAPMSHTFPERRAGKMTELLLAVQENLRERQMAESQHPDFQSPGN*

Click here to download the sequence:
Link to NCBI Protein BLAST