Transcript Information: S_Transcript_12490.p1


Annotated TAIR IDAT4G05590.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2907176-2908297 | Forward length=146
E-Value1.5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12490.p1 GENE.S_Transcript_12490~~S_Transcript_12490.p1 ORF type:3prime_partial len:81 (-),score=7.98 S_Transcript_12490:2-241(-)
ATGCAGCTCAACGCAAGAAGCAAACAACTCACTGAAAATTTAGTTTCTGCCAGAAGTAAACCAGCCAGAAATGCACCTAATGCCATGGAGAGACCAGCCTATTTGCTGAGGATCCGAGAGCTTCTCTGGAGGTTTTTGAAAATTGGCAATATTAGCTATACTGATGCCCCATTTAAATGTTGGTGCCCAAAAGTGAACTGTTTAAGAAGTGTATCACATTTCTTGCCGATGCAGCTCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12490.p1 GENE.S_Transcript_12490~~S_Transcript_12490.p1 ORF type:3prime_partial len:81 (-),score=7.98 S_Transcript_12490:2-241(-)
MQLNARSKQLTENLVSARSKPARNAPNAMERPAYLLRIRELLWRFLKIGNISYTDAPFKCWCPKVNCLRSVSHFLPMQLT

Click here to download the sequence:
Link to NCBI Protein BLAST