Transcript Information: S_Transcript_124967.p1


Annotated TAIR IDAT5G27220.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9578757-9582752 | Forward length=1181
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.064438259649347
Replicate 20.21368319184034
Replicate 30.044655535311382
Condition 2: 8 Hour
Replicate 10.28399430204414
Replicate 20.81253687553486
Replicate 30.33547944172489
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15267581359029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124967.p1 GENE.S_Transcript_124967~~S_Transcript_124967.p1 ORF type:3prime_partial len:826 (+),score=222.64,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.4e+04,Frigida|PF07899.7|4.8e-35,Frigida|PF07899.7|5.4e-53 S_Transcript_124967:244-2475(+)
ATGAAGGCCTTGGAGTCAAGAGAGAAAGAAATGAATGAGGTTTTGAAGGCGGCTGATTCAAGTAGGCAAATAAGAGGGAGGTGCAAAGAATTAGAATTGAAAGAGAAGGAAGTTGAGAAACGTTTAAGAGTGATAGAGTTGAGAGAGAAGGATGTGAAGGAAGGTATAAAAGTGCTGGAGTTGATAGAGAAGGATATACATGAACAATTGGAGGTGAAAGAGAAGGATATTAATGAGCAAATGCAGGTTTTGAAAGGGAAAGAGAAGTTCATGAATGAGCAAATGAAGGTTTTGGAGGTGAAAAAGAAGTTGATAGATGAGCAAATGAAGGTTTTGGAGGTGAAAGAGGTTCTGGAAGTGAAAAAGAAGCATGTACATGAGCAATTGGAGGTGAAAGAGAGGCATGTCAATGATCAAATGAAGGTTTTGGAGGTGAAAGAGAAGCATCTAAATGAGCAAATGGAATTGAGGGAAAAACAAATGAACGAGGGCCTTACGGCTCTTGAATTAGTGGTGAAACAAGTAGATGAGTTTTCCAAAGGGTTGGTACAGAAATGTTTCCAAGCAATGACAGTAAGAGAGGAGCAAATCAATGAGTGTTTTCAATGTCTTGAATTAAAGGCGAAGCAAATTCGTGAGCGTTATCAAGCAGTAGAGTTGAAAGAAAAGAAGTTAAAGAGGCGTCTTGCAGTATTAGATATTAGGGAGCAGAAAATCAATGAGCATTATCATAGTTTGGGAGCACAAGAATTGAAACCCAAGCGTATGTGTGACCATTGCAACATGCTAGAACTGAAGAACATACAAGGTTGTGAGGTTTCAGTGTTGGAAGACAAACAAATCAATGAAGATTGCAAGGTGGTGGGGTTGAGGGAGAAGAAATTGACTGAAACTGTAAATTTGCAGGTCGAGGCTTTTACCTCAGACAACAACTTGAGGGTTGGTGACGATGGGGATGAAAATATAATCCTTAATCTTTGCAAAGCAATGAATGGGAAAGCCTTGCAAATGTTTTTGAATGAGAGGGTTAATGAACATGAATCAATGGGAGAAAAAGTTGGTAATGCACTTAAGCTTTCAATTGACCCACCAAAGCTGGTGTTAACTGCTGTTGATAGCTTTTTCCCATCAAACATCAAGAGCAGTGACATGCTACATAAAACAAGTGTTGTTAGGAGCAGTTGTGTGTTCCTGTTGGAGCAGTTGATGATCATGAAACCCATTGTCAGTGAAGCTGTGAGAATAGAGGCTGTGAAAGTGGCGACCGGGTGGAGGGAGAAAGTGAAGGATGAGGGAGAGACTGATGTGGTGGTGCTGGGATTTTTACTGTTCTTAGCCTCGTATAGATTGGTGTCGAATTTTGAGAGGGATGAGCTTCGGCGACTTTACAGGAGGATTGATCATCATAGATTGGCACCCGATTTATGTCTTAAACTTGGCCTGATGAAAGCAAAGACTGTTAACAACAACCCGCCACAAAGGAAAATTGAGCCATGTCAGCCAGAAACATTGGAAGTAACTAGTAGATCTAGAGTAGATTCTAGTTCCACAAATGTTTCAAGTGATATTCAGTTGTTGTGCAGAAATATGGATTTAAATGGTGTGACATCTTATCTCATTAATCATGCGAAAGAGAGTGATTTATTGCATGAACAAATTCCGGATGCTCTTCGGTTAGCTGCAGATCCAGCTAAGCTTGTTCTTGATGTGACTAGAAGGTTTCACCAATTGAAGTTGGGCAGTGATCTAATTGATGATTGTAAAGCTTGTTTCATGCTGTTGTTAGTTAAGTTGATGAACCTACAAGCAGATTTGACACCTCATGTGAAAGATGAAGCCAGAAAATTTGCTGCAGTTTGGAGAGATTCGTTGGCTGAACTGGGCAATACCTCTTTGGAAAACTTTAGCTTTTTGCAATTTTTAGCGTCATACAAGTTAGAAAGGTTATACAAAACAAATGAGCTTCTGTCACTTTTTGAAACTATATACAGTGATAGTAAGCTGTATTGGCCGGAGCAAATCCCATTTTTATGCAATGCATTGGAACTGGCAGAGAAGATTCCAGGTCTTATCCAATCTATTATTAGGAGAAATGAACATGTTCAGGCAGTCCGGTACATATGTACACTTAAGATGGAATATGCTTTCCCACCAGTCCCTCTTTTGAAAGCCTACTTGGATATCATCAGGAAGAGAGTGGAAGAGATATGCAGGAAAGGCAATGATAATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124967.p1 GENE.S_Transcript_124967~~S_Transcript_124967.p1 ORF type:3prime_partial len:826 (+),score=222.64,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.4e+04,Frigida|PF07899.7|4.8e-35,Frigida|PF07899.7|5.4e-53 S_Transcript_124967:244-2475(+)
MKALESREKEMNEVLKAADSSRQIRGRCKELELKEKEVEKRLRVIELREKDVKEGIKVLELIEKDIHEQLEVKEKDINEQMQVLKGKEKFMNEQMKVLEVKKKLIDEQMKVLEVKEVLEVKKKHVHEQLEVKERHVNDQMKVLEVKEKHLNEQMELREKQMNEGLTALELVVKQVDEFSKGLVQKCFQAMTVREEQINECFQCLELKAKQIRERYQAVELKEKKLKRRLAVLDIREQKINEHYHSLGAQELKPKRMCDHCNMLELKNIQGCEVSVLEDKQINEDCKVVGLREKKLTETVNLQVEAFTSDNNLRVGDDGDENIILNLCKAMNGKALQMFLNERVNEHESMGEKVGNALKLSIDPPKLVLTAVDSFFPSNIKSSDMLHKTSVVRSSCVFLLEQLMIMKPIVSEAVRIEAVKVATGWREKVKDEGETDVVVLGFLLFLASYRLVSNFERDELRRLYRRIDHHRLAPDLCLKLGLMKAKTVNNNPPQRKIEPCQPETLEVTSRSRVDSSSTNVSSDIQLLCRNMDLNGVTSYLINHAKESDLLHEQIPDALRLAADPAKLVLDVTRRFHQLKLGSDLIDDCKACFMLLLVKLMNLQADLTPHVKDEARKFAAVWRDSLAELGNTSLENFSFLQFLASYKLERLYKTNELLSLFETIYSDSKLYWPEQIPFLCNALELAEKIPGLIQSIIRRNEHVQAVRYICTLKMEYAFPPVPLLKAYLDIIRKRVEEICRKGNDNA

Click here to download the sequence:
Link to NCBI Protein BLAST