Transcript Information: S_Transcript_124998.p1


Annotated TAIR IDAT2G38420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16091093-16092454 | Forward length=453
E-Value3.3E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1079604938757
Replicate 22.0096798408825
Replicate 31.9355742820413
Condition 2: 8 Hour
Replicate 12.5337097406495
Replicate 22.7023421129175
Replicate 32.1948991593248
Condition 3: 24 Hour
Replicate 12.9847464571307
Replicate 22.4683359142557
Replicate 31.7480624835229


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_124998.p1 GENE.S_Transcript_124998~~S_Transcript_124998.p1 ORF type:complete len:505 (+),score=69.31,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|4e-05,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|30,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|54,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|3.2e-08,PPR_1|PF12854.3|3.1e-08,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.34,PPR|PF01535.16|0.0035,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|0.0082,PPR|PF01535.16|2.4,PPR|PF01535.16|0.00023,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|0.67,PPR|PF01535.16|1.6,PPR_3|PF13812.2|4.8e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|1.3e+04 S_Transcript_124998:84-1598(+)
ATGGTGCTACGACCCTCAACAGCCAAAGCAATCCGCAGCACATTCCTAAGAAAGAAAAGAAAATTTCCACATTCCCCTTGCAAAACCCAATGGCACTTCACTTTTTCTCAACAACAAGCCCTTCAAAATCTCAAAAAATTATCCCTTCAAAATTCACCCGTTCAACAAAACCCCCAAAACCCATCTAAAACCCTACCTTTCCTTCTCAAATCCCGAATTGATTCCTTCAACTCCTATAACTGTGAACCCACCCCGACTGCCTATCAATTCATCATCAAAACCCTAATTCAAAATTCCCAATTCACTGAACTCAACCATGTTCTCTCTCACCTCCAAAAGGTTGAAAATTTCGAAACCCCAGAAAGTATTTTGGTTAATTTGATTAGGGTTTATGGAAAAAAGGGTATGATTCATGAAGCTATTGATTTGTTCTTCAAGATTCCCTCTTTCAGGTGTGTTCCTACTGTGAATTCACTCAATTCATTGATTTTGATATTATGTAGAAATAGAGAATTTTTGAGATTTGTTCCTCAATTGTTGTTAAAGAGTAGGGTTCTGAATATTCAGATCGAGGAATCGAGTTTTTCGATTTTGATTAGTACCCTTTGTAGGATTGGTAGGGTTGATTATGGTCTTAAGTTGCTCAAGTATATGATTGATGATGGCTTTAACCCTGATGACAAAATTTGTTTTTTGGTATTGTCATCATTGTGTAAGCAAAAGGGTATGACTAGTTTTGAGGTAATTAATGTTATGGAGGATATGAAAGGGTTTGGTTTTTGCCTCGATAGAGCTGATTTTTACAATGTGATTAAGTTCTTAGTTCAACAAGGAAAGGGTAAAGATGCATTTGATGTTCTGTGTGAAATGAAAAGGGAAGGTATTAAGCCCGACATTGCCTGCTATACGATGGTTTTGCACGGTCTTGTTGAAGGAGGGGTGTTTCCTAGAGTAGAAGAGTTGTTTGATGAAATTCTCGTGTTTGGTTTGGTTCCAGATGTGCGCACTTATAACACGTACATAAACGGGTTATGCAAGCAAAAGAAAACTGATTCTGCTTGTGCAATGATTAGTTATATGCAGCATCTTGGTTGCCAACCTGATTTGGTTACTTACAAGACAGTCTTGGAAGCATATTGTAAGTTCGGGGAATTGAGAAGGGCAAGGGAAGTTTGGAAGGAGATTAAACGGAAAGGCGTGGAATTAGATTTGGAAACATATAGGATAATGATTGAAGCATTTGTCACTCATAGTGAAGCTAGTGAAGCTTGCAATATGTTGGAAGAATTGCTTTCCAATAGTTCAATTGCTATGTCTTCTTCACTTGATGGTATCATAGGTAGTCTGTGCCGTGGGGGACTTGTTTCAGAGGCACTAAACACATTTGAAAAAGCTTATTCTTGTGATGTTGTTCCTGGGTGTAGGGCTTGGGCAGCACTTCTGCTCGGTTTGAACCTTAACCTTGGTTATGAGACAGATTTGGTGGCTAATTTGGTAAACTTACATGAGGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_124998.p1 GENE.S_Transcript_124998~~S_Transcript_124998.p1 ORF type:complete len:505 (+),score=69.31,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|4e-05,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|5e-16,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|30,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|9.3e-05,PPR_1|PF12854.3|54,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|3.2e-08,PPR_1|PF12854.3|3.1e-08,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.34,PPR|PF01535.16|0.0035,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|0.0082,PPR|PF01535.16|2.4,PPR|PF01535.16|0.00023,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|0.67,PPR|PF01535.16|1.6,PPR_3|PF13812.2|4.8e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|1.3e+04 S_Transcript_124998:84-1598(+)
MVLRPSTAKAIRSTFLRKKRKFPHSPCKTQWHFTFSQQQALQNLKKLSLQNSPVQQNPQNPSKTLPFLLKSRIDSFNSYNCEPTPTAYQFIIKTLIQNSQFTELNHVLSHLQKVENFETPESILVNLIRVYGKKGMIHEAIDLFFKIPSFRCVPTVNSLNSLILILCRNREFLRFVPQLLLKSRVLNIQIEESSFSILISTLCRIGRVDYGLKLLKYMIDDGFNPDDKICFLVLSSLCKQKGMTSFEVINVMEDMKGFGFCLDRADFYNVIKFLVQQGKGKDAFDVLCEMKREGIKPDIACYTMVLHGLVEGGVFPRVEELFDEILVFGLVPDVRTYNTYINGLCKQKKTDSACAMISYMQHLGCQPDLVTYKTVLEAYCKFGELRRAREVWKEIKRKGVELDLETYRIMIEAFVTHSEASEACNMLEELLSNSSIAMSSSLDGIIGSLCRGGLVSEALNTFEKAYSCDVVPGCRAWAALLLGLNLNLGYETDLVANLVNLHEG*

Click here to download the sequence:
Link to NCBI Protein BLAST