Transcript Information: S_Transcript_125260.p1


Annotated TAIR IDAT1G19220.1
Annotated Gene Nameauxin response factor 19
Annotated Gene Symbol(s)ARF19, IAA22, ARF11
Annotation TypeOrtholog
Chromosome Positionchr1:6628395-6632779 | Reverse length=1086
E-Value3.9e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6393059076212
Replicate 23.3428469026538
Replicate 32.6249991670873
Condition 2: 8 Hour
Replicate 14.4452374673914
Replicate 23.122608809218
Replicate 33.3471165660714
Condition 3: 24 Hour
Replicate 13.1292946047132
Replicate 22.8095634185555
Replicate 32.7561279010182


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125260.p1 GENE.S_Transcript_125260~~S_Transcript_125260.p1 ORF type:complete len:1089 (+),score=175.22,Auxin_resp|PF06507.9|4.5e-34,B3|PF02362.17|1.4e-19,B3|PF02362.17|5.8e+03,B3|PF02362.17|5.2e+03,AUX_IAA|PF02309.12|6.6e+03,AUX_IAA|PF02309.12|9.5e+03,AUX_IAA|PF02309.12|8e-08 S_Transcript_125260:368-3634(+)
ATGAAGTCTTCAGCTAGTAGCAACAACTCTGGTCCTCAACCTGCTGCTACTAATCCTTCTGAAGTAGAGAAGAAGAACATTAATCCGGAGTTATGGCAAACGTGTGCAGGACCTCTGGTAAATTTACCAGCTGCTGGGACCCACGTTGTGTATTTTCCTCAGGGTCACAGTGAACAGGTAGCAGCATCTATGAAGAAGGATGTGGATGCTCAGATACCAAACTATCCGAATTTGCCTTCAAAACTACTATGCTTACTTCACAATGTGACATTGCACGCAGATCCAGAAACGGATGAAGTATATGCTCAGATGACACTCCAACCTGTTCCCACTTTTGATAAAGAGGCATTGTTGAGATCTGACCTATCACTTAAGGCACATAAACCACAAACAGAATTTTTCTGCAAGACCTTAACTGCCAGTGATACAAGCACCCATGGAGGCTTCTCTGTACCACGTAGAGCAGCAGAGAAAATATTCCCCCCCCTCGATTACTCTACGCAACCACCCGCGCAAGAACTTGAGACCAGGGACTTGCATGATCATGTGTGGACTTTCCGCCACATATATCGCGGACAGCCAAAAAGGCACCTGCTTACGACAGGATGGAGCCTATTTGTTAGCGGAAAGAGGCTTTTTGCTGGCGACTCAGTTTTGTTTATAAGAGATGAGAAACAGCAGCTTCTTTTAGGCATTAGACGTGCTAATAGACAACCAACTAATTTGTCGTCATCAGTTCTCTCAAGCGACAGCATGCATATTGGAGTCCTTGCTGCTGCTGCACATGCAGCTGCAAACAACAGTCCGTTCACAGTTTTCTACAATCCAAGAGCTAGTCCATCGGAGTTCGTGATTCCACTAGCCAAGTATTACAAGTCTATTTATGGTCAGCAAGTATCCCTTGGCATGCGATTTAGGATGATGTTTGAAACTGAAGAGTCGGGAACTAGAAGGTATATGGGTACTATTACAGGTATTACTGATCTGGATCCTGTACGCTGGAAGAACTCACAATGGCGTAATTTGCAGGTTGGCTGGGATGAGTCAACTACTGGAGAAAGACGTAATAGGGTCTCTGTTTGGGAGATTGAACCTGTGACAGCTCCGTTTTTTATATGTCCTCCGCCATTCCTCAGACCAAAGCGTCCGAGATTACCAGGAATGCCAGATGATGACCTCGATCTGGACAATCTATTCAAGAGGACAATGCCTTTTTTAGGGGATGATCCACATGCTTTAACGGGCTTGAGCTTAGTGCAGTGGATGAACATGCAGCAAAACCCATCATTGGCTAATCCAATGCAGTCGAATTTCTTAAATAATTTGCCTGGATCTACTTTACAAACCCTTCCTGCTGCTGAACTGTCCCGTCAATTAGGGTTTGGCTCACCACAGATTCCTCAACAAAGCAACATTCAGTTCAATTCTCAGAGACCTGTACAGTCGATTCAGCAGCTCGACCAGCTCCAGAAGGTTTCAGGAGCGCTGAACCCAATGAACTCTCTCATACAGTCACAGCAACAGTTATCTGATATATCTCAGCAACCAAGGCAAAACCTGATCAACCAAAGCCTAGCTTCAAGTCAAGTACAGTCCCAGCTGCTTCAGTCTCAGGCTCTTGTACAAATCCCTAATTCACTCCAACAGTCCTCGTCTCTAAATAACCATCAGCTCCCGGGAAATCTGCCTCAGATACTGCCTCAACATCAGCTGCAGCAAAATTTGGGACAAAATCAGCAACAAAGTTTACTGCAATCGCAGCTTCCTGATCTTGCGAATCAACAAGCACAGGTTACTCACAGTCAAATGCATCTTCAAATATTGCAAAGGCTTCAACATCAACAGCAATCACTATTATCTCAGCAGCCTGTTTCACCGCAAGTAAATCACGTAAATCAACTCCAAGGGCCACAGACAGCTCTGCTCGATGTTTCTCAAGGCTTTCCTCGGTCTTTCCAGCCCTCACAATTGTCCGGTATACCTCAAACACAAATGACGTCTCTCTCTCAGTCCCAGATCCTTGCACCGCAAATAACCAAGACTAACAATCAGATAAACTTGCAATTCCCTCAACCATCTCAGGTGCCACAGCAGGGTCCGTCAGGGCTTGTGTTGAACCCTATGTCAAATCATCTTGCCACAGCCGGGAGTAGCAATTTGACAGGAGCTGCTGCAGCTGGGCAATCTGCAATCACAGACGAGTTTCCATCTTGTTCAACTTCACCATCCACAAATAACTGTCCTATCGTTGCTCAAACAATCATGACTAGTACTAGTCATCGAAGCGGTACCATGGGAGAGGGGATTATTCAACCCTCTACCAATCTTTTGAGTTCTAACTCTTTGGAGACCATGTCAGCTAATGCGCACTTGGTTAAAGACGTGCATCAGAAAGCGGATGTCAAACCTTCTGTAAACATTGCCAAGGTTCAAAGCCAAGGACATTTAACTCGGCAACATTATCATACCGTCCCTTCCTCTCAAACGGATTACTTAGACACATCCTCGGCAACTTCAGCTTCTCTATCTCAGAATGATATTATGAGCCAGAACAATCCACTTTCCAATTCACATTCAATTTTGTTAGGAGATGCAGGTCATGATGTGGAGGTACAAGCTGACCTTAGAAACAATTTTCACACAGGTGGAAATATTAATGGTCCTATGGGAACTTCCTTGGTTTCTGACATGCTCACGAAGAATACACCTGGGCCTCATAAGAATTTCTCAAATAACGTCTCTTCTGGTGGTATGCTTGGTAACTATGATAGCTCAAAAGATGCCCAACAAGAGCTCTCATCGTCAATGGTCACACAATCATTTGGTGTTCCAGATATGGCATTCAATTCAATTGATTCTGCTATAAGTGATAGCAGCTTTATGAATAGGGGCGCATGGGGCCAGCCTCCACAGTATCAACGGATGCGTACATACACAAAGGTCTACAAGCGTGGAGCGGTTGGTAGATCCATTGATGTTACTCGTTATGCGGGTTATGAGGAGCTTAAACAAGATCTGGCTCGTATGTTTGGTATAGAAGGCCAAATGGAAGACCGTGGGAGAGTTGGCTGGAAACTTGTGTACGTGGATCATGAGAATGATGTCCTGCTAGTTGGTGACGACCCTTGGGAGGACTTTGTGAATTGCGTTCGGTGCGTAAAGATCCTTTCACCTCAAGAGGTTCAACAAATGAGCCTTGATGGCGATTTTGGTAATGCTTCTTTACCCAATCAAGCTTGTAGCAGTTCAGATGGTGGCAATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125260.p1 GENE.S_Transcript_125260~~S_Transcript_125260.p1 ORF type:complete len:1089 (+),score=175.22,Auxin_resp|PF06507.9|4.5e-34,B3|PF02362.17|1.4e-19,B3|PF02362.17|5.8e+03,B3|PF02362.17|5.2e+03,AUX_IAA|PF02309.12|6.6e+03,AUX_IAA|PF02309.12|9.5e+03,AUX_IAA|PF02309.12|8e-08 S_Transcript_125260:368-3634(+)
MKSSASSNNSGPQPAATNPSEVEKKNINPELWQTCAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPTFDKEALLRSDLSLKAHKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSTQPPAQELETRDLHDHVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSIYGQQVSLGMRFRMMFETEESGTRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTTGERRNRVSVWEIEPVTAPFFICPPPFLRPKRPRLPGMPDDDLDLDNLFKRTMPFLGDDPHALTGLSLVQWMNMQQNPSLANPMQSNFLNNLPGSTLQTLPAAELSRQLGFGSPQIPQQSNIQFNSQRPVQSIQQLDQLQKVSGALNPMNSLIQSQQQLSDISQQPRQNLINQSLASSQVQSQLLQSQALVQIPNSLQQSSSLNNHQLPGNLPQILPQHQLQQNLGQNQQQSLLQSQLPDLANQQAQVTHSQMHLQILQRLQHQQQSLLSQQPVSPQVNHVNQLQGPQTALLDVSQGFPRSFQPSQLSGIPQTQMTSLSQSQILAPQITKTNNQINLQFPQPSQVPQQGPSGLVLNPMSNHLATAGSSNLTGAAAAGQSAITDEFPSCSTSPSTNNCPIVAQTIMTSTSHRSGTMGEGIIQPSTNLLSSNSLETMSANAHLVKDVHQKADVKPSVNIAKVQSQGHLTRQHYHTVPSSQTDYLDTSSATSASLSQNDIMSQNNPLSNSHSILLGDAGHDVEVQADLRNNFHTGGNINGPMGTSLVSDMLTKNTPGPHKNFSNNVSSGGMLGNYDSSKDAQQELSSSMVTQSFGVPDMAFNSIDSAISDSSFMNRGAWGQPPQYQRMRTYTKVYKRGAVGRSIDVTRYAGYEELKQDLARMFGIEGQMEDRGRVGWKLVYVDHENDVLLVGDDPWEDFVNCVRCVKILSPQEVQQMSLDGDFGNASLPNQACSSSDGGNV*

Click here to download the sequence:
Link to NCBI Protein BLAST