Transcript Information: S_Transcript_125282.p1


Annotated TAIR IDAT4G32300.1
Annotated Gene NameS-domain-2 5
Annotated Gene Symbol(s)SD2-5
Annotation TypeOrtholog
Chromosome Positionchr4:15599970-15602435 | Forward length=821
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4748381193243
Replicate 27.3720701184916
Replicate 39.0874014358661
Condition 2: 8 Hour
Replicate 13.0981196586634
Replicate 24.0085152526387
Replicate 32.42577442478
Condition 3: 24 Hour
Replicate 15.4479975775574
Replicate 24.9388451377028
Replicate 34.702415058581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125282.p1 GENE.S_Transcript_125282~~S_Transcript_125282.p1 ORF type:complete len:826 (+),score=139.44,Pkinase|PF00069.21|2.6e-51,Pkinase_Tyr|PF07714.13|2.1e-44,B_lectin|PF01453.20|2.2e-19,B_lectin|PF01453.20|2.9e+02 S_Transcript_125282:917-3394(+)
ATGGGAAAGTGGGGTTTCAATCACTTCATAGTACTCCCCATATGCTTACTTGTTTTTCTTTTATTACCAAAATCATGTATTGCAAGTATTCAACTCATAGGGACCATGACACCAGGAACTTCAGCCTCTCAAATGGGTTATATTGACAATGATGGGTTATTTCTCTTGTCAAATGATAGTAGCTTTGCATTTGGGTTCAAAACAACCCAAGATGTAACTCAATTCCTATTGGTAATTATTCACCAGGATAGCTCCACTGTTGTGTGGACAGCAAATAGAGGCTCACCAGTTGCAAATTCTGACAGTTTTGTGTTTGATAGTAAGGGCAAAGTGAGCCTTCAAAGTGGTGGAAAACCCATTTGGGTACCTGATACTGGTGGCAAACCAGTTTCTTCTGTTGAGTTGCAGAATTCAGGAAATCTGGTGTTGCTTGGGAGTGATAATAATGTGGTTTGGCAAAGTTTTAGCCATCCTACCAATATGCTTCTTTCGAGTCAGGATTTCACTGAAGGGATGAAGCTTGTGAGTGATTTGGATCCAAAGAGGGATAACTTGACTTACATACTTGAGATTCAATCTGGGGATTTGAATCTTTATGCTGGGTATAAGACACCACAGACTTATTGGTCTATGTCAAGAGATAGCAGGAAAATCATTAATAAGGATGGTGCTGGCGTTAGTTCAGCAAGGATTGAGGGGAATTCCTGGAAGTTTTATGATCAAAATAAAGTTTTGTTGTGGCAATTTGTGTTCACCACAAATACTGGGAATTCTACTTGGATTGCAATGCTTGGGAGTGATGGTTTTGTAAGCTTTTATAATCTCGGGACAGGTTCATCGAAGGTGCCTGCCTCGATAAAAATACCTAGCGATTCATGTGGAACTCCGGAGCCCTGTAATACTCCCTATGAAGCTTGTTCTAGCTCTAATAACAGGTGTCTGTGCCCTTCAGGACTCCTCTCTCGGAACTGCAAAACCGGGATCTCCTCTCCTTGTGGAAGTGCAAATGAACCTGTTAAGCTGATCTCTGCAGGAGATGGTCTGAGCTATTTTGCTCTTGGATTTGTTAAGCCTACCTCGAAAACTGATCTCAATGGGTGCAAGGCATCTTGTGCTGGTAATTGTTCATGCCTTGCTTTGTTCTTTGACAACAGTTCAGAGAGCTGTTACCTATTTGATAGGGTTGGAAGCTTCCAATCTGACAGCGCATCCAAGTATTCCGTCTATGTAAAGGTCTCGATGAATGGGGATGATCCTGGAAATGGTAGCAATAAAAATAGCAGTAAGCATTTGGCTGTCATCATAACCATAGTCATTCTGACAGTATTCATCATTCTGGGTTTGGTTTTCGTAGGGTACAAGTATCACAAGAAGAAGAGACAATTGCCTGAATCTCCTCAGGAGACTTCGGAAGAGGATAATTTCCTCGACACATTGGCAGGGATGCCTGTAAGGTACAGCTACAAGGATCTGCAAGATGCTACCGATAACTTCACTGTGAAGCTAGGGCAAGGAGGGTTTGGGTCGGTTTACCAAGGGAAACTTTCAGACGGAACCCAAATTGCTGTCAAGAAATTGGAAGGGGTTGGACAAGGGAGAAAGGAGTTCCGAGCTGAAGTGGGGATTATAGGCAGCATTCATCATGTTCATTTGGTAAGACTAAGAGGCTTTTGTACGGAAGGCAGTCACCGCCTTCTAGCCTATGAATTCATGGCAAATGGGTCCTTAGACAAGTGGATATTCAAGAAAAACAAGAACAATGAGTCGGTTTTGGATTGGGAAACGAGGTACAATATTGCTGTTGGAACTGCCAAGGGATTGGCTTATCTCCATGAGGACTGTGATGTGAAGATTGTTCATTGTGACATAAAACCCGAGAATGTGCTTCTTGATGATCATTTTGAGGCAAAGGTGTCGGATTTTGGGTTAGCAAAGTTGATGACGAGGGAGCAAAGCCACGTTTTCACCACTCTTCGAGGCACCAGGGGATACTTAGCACCAGAATGGATCACAAACTATGCAATATCAGAGAAAAGCGATGTTTACAGCTATGGAATGGTCCTGCTTGAAATCATCGGGGGAAGGAAAAACTACGACCCTTTACAATCATCCGAGAAATCACATTTCCCGGCTTATGCATTCAAGATGATGGAGGAAGGCAAGCTCAGGGAAATCCTCGATTCAAGCCTTACATATGACCCCAACGAAGAAAGCGTTCAGACAGCAATCAAGGTTGCGCTATGGTGCATCCAGGAAGACATGACAATGAGGCCTTCTATGACCAAAGTTGCTCAAATGCTTGAAGGGATATCTCCTGTTCTCCTTCCTCCAACATCATCCTTAACAGGATCAAGGCTTTTCTCGAGTTTTTTCAGGTCGTTGAGTGAGGAAGGAACCAACACTGGCACCTCATCTGGTCCATCTGAATGCTACAGCGATGCTTACCTCTCGGCTGTCCGCCTCTCAGGACCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125282.p1 GENE.S_Transcript_125282~~S_Transcript_125282.p1 ORF type:complete len:826 (+),score=139.44,Pkinase|PF00069.21|2.6e-51,Pkinase_Tyr|PF07714.13|2.1e-44,B_lectin|PF01453.20|2.2e-19,B_lectin|PF01453.20|2.9e+02 S_Transcript_125282:917-3394(+)
MGKWGFNHFIVLPICLLVFLLLPKSCIASIQLIGTMTPGTSASQMGYIDNDGLFLLSNDSSFAFGFKTTQDVTQFLLVIIHQDSSTVVWTANRGSPVANSDSFVFDSKGKVSLQSGGKPIWVPDTGGKPVSSVELQNSGNLVLLGSDNNVVWQSFSHPTNMLLSSQDFTEGMKLVSDLDPKRDNLTYILEIQSGDLNLYAGYKTPQTYWSMSRDSRKIINKDGAGVSSARIEGNSWKFYDQNKVLLWQFVFTTNTGNSTWIAMLGSDGFVSFYNLGTGSSKVPASIKIPSDSCGTPEPCNTPYEACSSSNNRCLCPSGLLSRNCKTGISSPCGSANEPVKLISAGDGLSYFALGFVKPTSKTDLNGCKASCAGNCSCLALFFDNSSESCYLFDRVGSFQSDSASKYSVYVKVSMNGDDPGNGSNKNSSKHLAVIITIVILTVFIILGLVFVGYKYHKKKRQLPESPQETSEEDNFLDTLAGMPVRYSYKDLQDATDNFTVKLGQGGFGSVYQGKLSDGTQIAVKKLEGVGQGRKEFRAEVGIIGSIHHVHLVRLRGFCTEGSHRLLAYEFMANGSLDKWIFKKNKNNESVLDWETRYNIAVGTAKGLAYLHEDCDVKIVHCDIKPENVLLDDHFEAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPLQSSEKSHFPAYAFKMMEEGKLREILDSSLTYDPNEESVQTAIKVALWCIQEDMTMRPSMTKVAQMLEGISPVLLPPTSSLTGSRLFSSFFRSLSEEGTNTGTSSGPSECYSDAYLSAVRLSGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST