Transcript Information: S_Transcript_125303.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8603262999349
Replicate 21.4351523304403
Replicate 31.7726513323072
Condition 2: 8 Hour
Replicate 12.049721981938
Replicate 21.4986966564477
Replicate 31.510734830256
Condition 3: 24 Hour
Replicate 11.2088916106445
Replicate 20.88014802238242
Replicate 30.68564780907112


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125303.p1 GENE.S_Transcript_125303~~S_Transcript_125303.p1 ORF type:complete len:1030 (+),score=177.29,Pkinase|PF00069.21|1.1e-47,Pkinase_Tyr|PF07714.13|2.3e-39,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|8.9e-07,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|2.1e+02,LRR_8|PF13855.2|0.056,LRR_8|PF13855.2|0.06,LRR_8|PF13855.2|3e-07,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|0.00034,LRR_4|PF12799.3|0.002,LRR_4|PF12799.3|59,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|0.00027,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|3.4e+02,LRR_4|PF12799.3|4.6e+02,LRR_4|PF12799.3|34,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.0022,LRR_1|PF00560.29|5.8,LRR_1|PF00560.29|24,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|76,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|0.041,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|0.28,LRR_1|PF00560.29|5.4 S_Transcript_125303:247-3336(+)
ATGACAAAACTACCCCTATCTTCCCTCAAATATGCCCTTCTTTGTATATCCCTCCTCTTCAACTTGCTACCCCTTTTGGTCATTTCACAACCTCCCGCCTCAGAGCAGCAAATTCTGTTGGACATGAAGAAGTTTTGGGGCAACCAACCCCCTACACAAGCATGGGGTTCCTCTTCCACCGCCAACGCCACCAACTCGCCTTGCGGTTGGCCCGGTATCCAATGCTCCTCCGGTGGCGATACCATCACCGGAGTATTGCTTGGGGGCCAAAACATTCGAGGGAATGTCCCACCATTCATTTGTGATCTCAAGAATCTCACCACTCTTGATCTTAGTGACAACTATATAGGAGGAGAGTTTCCTACTTTCTTATACAATTGTTCTAACCTCCAAACACTAAACTTATCCCAAAACTTGTTTGTTGGGAACCTTCCAAATGACATAAATAAACTATCTCCTCAACTCCAAATCCTTGATCTTAGTGGCAACAACTTCACTGGTGATATCCCAAGCTCAATAGTAGAACTCAAAGAGTTGACCACATTGAACTTAGTATCAAATCTCTTCAATGGAACTTTTCCTTCTGAGTTGGGATATTTGGTCAACCTTGAGAATTTGTTCTTGGCTTATAATCCATTTTCTCCTTTGGAATTGCCCCCAGAATTTGGGATGCTTAAGAGCTTGAAGTTCCTTTGGATGAGTCAATGTAATTTGATTGGTAAAATCCCACAAAGTTTTGGTAATTTATCTAGCCTTGAGCACTTAGACTTGGTGGGTAATGCTTTGGTGGGTGATATACCAAGTGGGTTGTTCTTGCTTAAGAATTTGACCTTCTTATACTTGTATCATAACGAGCTTACAGGTGGGCTTCCAACCTCCATTGAAGCTTTGAGTTTGAAGGAACTTGATCTCTCAAACAACAATTTAACTGGAACAATACCAGATGGGATTGGAAAGTTGCCAAGATTAGAGATGTTAATTTTGTTTAGTAACAACTTTTATGGGATGTTACCATCAAATATAGGCCTTATTCCTACATTGAAGGTATTGAGGCTATGGAGGAACAGTTTCACTGGTCCTCTGCCCCCGGAATTAGGCCTCCACTCGAAGCTCGAGGCCTTGGAGGTTCCTGAAAATGGATTCACCGGTAGCTTGCCGGAACATCTCTGTGCTGGTAAGACCTTGTTTGGTTTGGTGGCATTCAACAACAAGCTCAATGGGTCAATACCAAGTTCTTTGGGTCAATGCCATTCTTTGCTCACAATTCAGGTCTACAACAACAGCTTTTCAGGGGAAGTCCCTCAAGGGATATGGACTTTGAGGAACATTTCGACATTGACATTGAGTGATAATCAATTCTCCGGCCAGTTACCGGAGAATTTGGCTTGGAACATGACTCGAGTTGAGATGAATAACAACAAATTTACAGGGGAAATTCCACCAAGTGCTGGAACTTGGAAGAGTTTGGTGGTTTTTGAGGCTAGTAATAATATGTTGTCAGGTACTATTCCATTGGAGATCACTAGCCTTTCGCGCCTTAACACTCTCCTTCTTAATGGAAATCAACTCTCAGGTGAGCTTCCCTCTCAAATCAATTCATGGCAACGCTTGAATAACTTGAACCTTGCAGGGAACGAGCTTTCTGGCTCGATCCCTCCTGTTCTTGGCTCACTGCCTGTGCTTAATTATCTTGATTTGTCGAATAATAAGTTGACTGGCAAAATCCCTCCTGAATTAAGCCATCTAAAGATCACTTCTCTTAACCTTTCTTCTAACAAGCTCACTGGGAGCATCCCTTATGAGTTTGATAATGATGCATATGGAGATAGTTTCTTGAACACCAACTTATGTTCTGATGGTGGAGTGTCGAACCTTCCTAAATGCTTGCTTTATCGACAAAATTCCAAGAGCTTGTCCTCCAAATATCTTGCTTTGATCCTAGTCCTTGCAATAGTAGCTTTCATAGCAACTATGTACTGCTCTTGGTTCATGATCAAGGAATTCCGGCAAAGGAAACATAGCCATGATCTTACAACATGGAAATTGACCTCATTCCATAAGGTAGACTTCACAGAAGAGAAAATCCTTGTAAACCTGAATGAAAGCCATATGATAGGATCAGGGGGTTCCGGAAAAGTTTACTGCATACCCACAAACCGGTCAGGAGATGTTGTCGCGGTTAAGAGGATATGGAACAACAAGAAAATGAACAATACATTAGAGAAGGAGTTCCTAGCTGAGGTTCAAATTCTGGGTACAATCAGACATTTGAACATAGTCAAGTTACTTTGCTGCATTTCGAGTGAGGACTCGAAACTCCTAGTTTATGAGTACATGGAGAATCAGAGCCTCGATAAGTGGATCCATTCAGGGAAAAAGAGACCTGTTTCTTCATCTATGAATGGGTCTGTTCTTGATTGGCCTGCAAGATTGAGGATTGCTATTGGGGCTGCTCAAGGGTTAAGCTACATGCACCATGACTGTTCACCACCTATTATTCACAGGGATGTGAAATCCAGTAATATATTGCTGGATTCCGAGTTCAATGCTAAGATTGCGGATTTCGGACTTGCAAAAATTTTAGCTAAGCCTGGAGGTCAGCCTCACACAGTTTCTGCTGTCGCTGGCTCTTTCGGTTACATGGCCCCAGAATATTGCTACACAACCAAGGTGAATGAGAAGATCGACATCTATAGTTTCGGGGTGGTGCTCCTCGAACTGGTAACAGGAAAAGAGCCTCAGACAGGAGATGAGTACAGGAACCTAGCAGAGTGGGCATGGAGGCATTACAGTGAGGGACATCCAATTTCTGATATTCTCGACAAAGAAGTGAAGGAGCCTTGTTACTTGGATGAGATGATCAATGTATTCAAGATAGGGTTGATGTGTACCAACACAGTGGCTTCTTCTAGGCCGACAATGAAGGAGGTTTTGCAGGTGCTTCGACAGTGTAATGTTCTAGAGAGTTCTGGAAGAAGAAAGCTTGCAAAAGACCAAGATGTTACCCCTCTTCTTGGTGGTGGGAGCTATCTGTCTAGCTGTAAGAATAGCAGAAAAGCAGTGGAGGAAGATGTCTATAGCATGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125303.p1 GENE.S_Transcript_125303~~S_Transcript_125303.p1 ORF type:complete len:1030 (+),score=177.29,Pkinase|PF00069.21|1.1e-47,Pkinase_Tyr|PF07714.13|2.3e-39,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|8.9e-07,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|2.1e+02,LRR_8|PF13855.2|0.056,LRR_8|PF13855.2|0.06,LRR_8|PF13855.2|3e-07,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|0.00034,LRR_4|PF12799.3|0.002,LRR_4|PF12799.3|59,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|0.00027,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|3.4e+02,LRR_4|PF12799.3|4.6e+02,LRR_4|PF12799.3|34,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.0022,LRR_1|PF00560.29|5.8,LRR_1|PF00560.29|24,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|76,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|0.041,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|0.28,LRR_1|PF00560.29|5.4 S_Transcript_125303:247-3336(+)
MTKLPLSSLKYALLCISLLFNLLPLLVISQPPASEQQILLDMKKFWGNQPPTQAWGSSSTANATNSPCGWPGIQCSSGGDTITGVLLGGQNIRGNVPPFICDLKNLTTLDLSDNYIGGEFPTFLYNCSNLQTLNLSQNLFVGNLPNDINKLSPQLQILDLSGNNFTGDIPSSIVELKELTTLNLVSNLFNGTFPSELGYLVNLENLFLAYNPFSPLELPPEFGMLKSLKFLWMSQCNLIGKIPQSFGNLSSLEHLDLVGNALVGDIPSGLFLLKNLTFLYLYHNELTGGLPTSIEALSLKELDLSNNNLTGTIPDGIGKLPRLEMLILFSNNFYGMLPSNIGLIPTLKVLRLWRNSFTGPLPPELGLHSKLEALEVPENGFTGSLPEHLCAGKTLFGLVAFNNKLNGSIPSSLGQCHSLLTIQVYNNSFSGEVPQGIWTLRNISTLTLSDNQFSGQLPENLAWNMTRVEMNNNKFTGEIPPSAGTWKSLVVFEASNNMLSGTIPLEITSLSRLNTLLLNGNQLSGELPSQINSWQRLNNLNLAGNELSGSIPPVLGSLPVLNYLDLSNNKLTGKIPPELSHLKITSLNLSSNKLTGSIPYEFDNDAYGDSFLNTNLCSDGGVSNLPKCLLYRQNSKSLSSKYLALILVLAIVAFIATMYCSWFMIKEFRQRKHSHDLTTWKLTSFHKVDFTEEKILVNLNESHMIGSGGSGKVYCIPTNRSGDVVAVKRIWNNKKMNNTLEKEFLAEVQILGTIRHLNIVKLLCCISSEDSKLLVYEYMENQSLDKWIHSGKKRPVSSSMNGSVLDWPARLRIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDSEFNAKIADFGLAKILAKPGGQPHTVSAVAGSFGYMAPEYCYTTKVNEKIDIYSFGVVLLELVTGKEPQTGDEYRNLAEWAWRHYSEGHPISDILDKEVKEPCYLDEMINVFKIGLMCTNTVASSRPTMKEVLQVLRQCNVLESSGRRKLAKDQDVTPLLGGGSYLSSCKNSRKAVEEDVYSMV*

Click here to download the sequence:
Link to NCBI Protein BLAST