Transcript Information: S_Transcript_125308.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value1E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26524585948685
Replicate 20.14659660835558
Replicate 30.245086193802
Condition 2: 8 Hour
Replicate 10.14169694562879
Replicate 20.18581269634324
Replicate 30.24785869308118
Condition 3: 24 Hour
Replicate 10.072574363756127
Replicate 20.15059011014184
Replicate 30.16758833491771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125308.p1 GENE.S_Transcript_125308~~S_Transcript_125308.p1 ORF type:3prime_partial len:602 (-),score=73.20,LRR_8|PF13855.2|4.2e+03,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|9.7e-09,LRR_8|PF13855.2|0.0032,LRR_8|PF13855.2|0.0033,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.0001,LRR_8|PF13855.2|0.69,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|6.9,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|0.081,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|0.003,LRR_4|PF12799.3|28,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.6e+02,LRR_4|PF12799.3|3.9e+02,LRR_4|PF12799.3|2.7e+02,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00087,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.037,LRR_1|PF00560.29|0.34,LRR_1|PF00560.29|14,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|2.5e+03,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|89,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.81,LRRNT_2|PF08263.8|3.3e-07 S_Transcript_125308:1-1803(-)
ATGAAAAAATCATTCATATGTTTATCCTCGCTCAAGATTTTCTACCTTTGTATCACCGTCATCCTCACCTCCCTGCCCCTTTTGGTAATTTCCCAATCTCTGGCCTCCGAACGCGAAATCTTATTGAATATCAAGAAGCTATGGGGAAATCAACCCCCTACACAAGCATGGGACTCCACCACCTCCCCATGTAGCTGGCCCGGAATCCAATGTTTTGGCGATGAAACCGTCGTCGGTATCCTTATCGGCAACCAATACATTGCCGGGAAAATCCCACCTATCATTTGTGATCTCAAGAACCTCACCACCCTTGATCTTAGCTACAATAATTTTCAAGGAGAATTCCCTACTTCCCTATACAATTGTTCCAAACTCCAAAATTTAAACCTATCCTCAAACTTGTTTGTTGGGAAGCTACCAAATGACATAAATAAGTTATCACCTCAACTCCAACGCCTTGATATAAGTGGCAACAACTTCACCGGTGACATCCCAAGCTCAATAGGGCAGCTCAAAGGATTGATCACCTTGAACTTGACTAAAAATCTGTTCAATGGCACTTTCCCTTCTGAGTTAGGAAACTTGGTCAACCTTGAGGAATTGCTCTTACCCTACAACCCATTTGCCCCCATGAAGCTGCCCAGAGAATTTGGGAAGCTTAAGAGCTTGAAGTTCCTTTGGATGACCAAGTGTAATTTGATTGGGGAAATCCCAGAAAGTTTTCGTAATCTATCTAGCCTTGAGCAGTTAGATTTGGTGAAGAATGATTTGGTGGGTGAGATACCAAGTGGGTTGTTCTTGCTCAAGAATTTGACTTTCTTATACTTGTATAATAATAAGCTGTCCGGAGGGCTTCCTAACTCGATTGAGGCCTTGAGTTTGAAGGAAATCGATCTCTCGGCGAACAATTTGACAGGAACAATCCCAGATTGGATCGGAGACTTGCCAAGGTTGGAGATTTTGGATTTATTTAGCAATGATTTCTATGGAGTGTTACCACCAAATATAGGCCGTATTCCTACCTTGAAGGCATTAAAGCTGTGGAGCAACAGGTTCTCTGGTCCTCTACCCCCAGAATTAGGCCTACACTCAAACCTCGAGGAATTGCAGGTATCTGAAAATGGATTCACAGGCCAGCTGCCGGCAAATCTCTGTTCTGGTAAGACCTTGGTTGGTGTGGTGGCATTCGACAACAAGCTCAATGGGTCGATACCAAGTTCTTTAGGTCAATGCCACTCTTTGTTCACAGTTCAGCTCCACAAAAACAGCCTCTCAGGGGAAATACCTCAAGGGCTATGGACCTTGCAAAAGATATCAATATTGACATTCAGTGACAACCAATTGTCCGGCCAGCTACCGGAGAACTTGTCTTGGAATATGACCCAGGTTGAGATGAATAACAACAGATTTTCGGGAGAAATCCCATCGAGCGTAGGAACTTGGAAGAGTTTGGTGAAATTTCAGGCCAGCAACAACATGCTGTCAGGCACTATTCCATTGGAGCTGACTAGCCTTCCCCTCCTTGAGACTCTCATTTTGAGTGGAAATCAACTCACAGGTGAGCTTCCCTCTGAAATCATCTCATGGCAAAGCTTGAACAGCTTGATCCTGGCAGGGAACAAGCTTTCTGGACAGATCCCACCGCTTCTTGGCTCGTTGCCTGTCCTTAACTATCTCGATTTATCCAATAACCAGTTCTCCGGTCAAATTCCTCCTGAACTAGGTCATCTAAAGCTCAATTCTCTTAACCTTTCCTCTAATAAGCTCACAGGGAGCATTCCATACGCGTTTGATAATAATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125308.p1 GENE.S_Transcript_125308~~S_Transcript_125308.p1 ORF type:3prime_partial len:602 (-),score=73.20,LRR_8|PF13855.2|4.2e+03,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|9.7e-09,LRR_8|PF13855.2|0.0032,LRR_8|PF13855.2|0.0033,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.0001,LRR_8|PF13855.2|0.69,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|6.9,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|0.081,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|0.003,LRR_4|PF12799.3|28,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.6e+02,LRR_4|PF12799.3|3.9e+02,LRR_4|PF12799.3|2.7e+02,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00087,LRR_4|PF12799.3|0.00032,LRR_4|PF12799.3|0.037,LRR_1|PF00560.29|0.34,LRR_1|PF00560.29|14,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|2.5e+03,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|89,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.81,LRRNT_2|PF08263.8|3.3e-07 S_Transcript_125308:1-1803(-)
MKKSFICLSSLKIFYLCITVILTSLPLLVISQSLASEREILLNIKKLWGNQPPTQAWDSTTSPCSWPGIQCFGDETVVGILIGNQYIAGKIPPIICDLKNLTTLDLSYNNFQGEFPTSLYNCSKLQNLNLSSNLFVGKLPNDINKLSPQLQRLDISGNNFTGDIPSSIGQLKGLITLNLTKNLFNGTFPSELGNLVNLEELLLPYNPFAPMKLPREFGKLKSLKFLWMTKCNLIGEIPESFRNLSSLEQLDLVKNDLVGEIPSGLFLLKNLTFLYLYNNKLSGGLPNSIEALSLKEIDLSANNLTGTIPDWIGDLPRLEILDLFSNDFYGVLPPNIGRIPTLKALKLWSNRFSGPLPPELGLHSNLEELQVSENGFTGQLPANLCSGKTLVGVVAFDNKLNGSIPSSLGQCHSLFTVQLHKNSLSGEIPQGLWTLQKISILTFSDNQLSGQLPENLSWNMTQVEMNNNRFSGEIPSSVGTWKSLVKFQASNNMLSGTIPLELTSLPLLETLILSGNQLTGELPSEIISWQSLNSLILAGNKLSGQIPPLLGSLPVLNYLDLSNNQFSGQIPPELGHLKLNSLNLSSNKLTGSIPYAFDNNA

Click here to download the sequence:
Link to NCBI Protein BLAST