Transcript Information: S_Transcript_125434.p1


Annotated TAIR IDAT1G48900.1
Annotated Gene NameSignal recognition particle, SRP54 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18084972-18087743 | Reverse length=495
E-Value7E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1698022520958
Replicate 21.7779537372356
Replicate 31.756451055581
Condition 2: 8 Hour
Replicate 11.4060696912395
Replicate 20.57363714460838
Replicate 30.3123201114283
Condition 3: 24 Hour
Replicate 11.9204293178544
Replicate 21.5773348716139
Replicate 31.3858266156657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125434.p1 GENE.S_Transcript_125434~~S_Transcript_125434.p1 ORF type:complete len:273 (+),score=67.56,SRP54|PF00448.18|9.5e-28,SRP_SPB|PF02978.15|2.3e+03,SRP_SPB|PF02978.15|1e-21,SRP_SPB|PF02978.15|8.2 S_Transcript_125434:110-820(+)
ATGGATGGTCATGCAAAGGGAGGTGGTGCTCTTAGTGCTGTGGCTGCAACCAAGAGTCCTGTGATATTCATTGGTACTGGAGAACACATGGATGAGTTTGAGGTTTTTGATGTCAAGCCATTTGTTAGTCGCCTTTTAGGTATGGGTAACTGGGCTGGGTTCGTGGATAAAATTCATGAAGTTATTCCAATGGATCAGCAGTATGAGCTTCTGCAGAAGCTATCTGAAGGGAATTTCACTTTGAGAATTATGTATCAGCAGTTTCTGTACGTACTCAAGATGGGTCGATTCGGTCAGGTATTTTCACTGGTTCCTGGATTTAGTGCTGAGTTAATGCTCAAAGGTCAAGAAACGGAAAGCCACGCAATTAAACGCTACATAACCATGATGGATTCAATGACAGATGAAGAGTTGGATAGTTCAAATCTGAAACATATCAATGGATCAAAAATCATGCGTATTGCTCGTGGATCTGGTCGTCCTGTTGGAGAAGTGATGGATATGTTTGAGGTGTACAAACACCTAGCGAAGAAGATGAAGGGACTTAAGCTTCCTAAGAAGAGAGGAATGAGTGCCTTATCACGAAATATGAATGCACAACATATGAGCAAGGTCCTTCCACCAGAGATGTTGAAGCAAATCAGTGACATGGGGGGATTGCAGAACTTGATGAAACAAATAGGTTCTGCTAAACACAAGATGGGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125434.p1 GENE.S_Transcript_125434~~S_Transcript_125434.p1 ORF type:complete len:273 (+),score=67.56,SRP54|PF00448.18|9.5e-28,SRP_SPB|PF02978.15|2.3e+03,SRP_SPB|PF02978.15|1e-21,SRP_SPB|PF02978.15|8.2 S_Transcript_125434:110-820(+)
MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGNWAGFVDKIHEVIPMDQQYELLQKLSEGNFTLRIMYQQFLYVLKMGRFGQVFSLVPGFSAELMLKGQETESHAIKRYITMMDSMTDEELDSSNLKHINGSKIMRIARGSGRPVGEVMDMFEVYKHLAKKMKGLKLPKKRGMSALSRNMNAQHMSKVLPPEMLKQISDMGGLQNLMKQIGSAKHKMGR*

Click here to download the sequence:
Link to NCBI Protein BLAST