Transcript Information: S_Transcript_125468.p1


Annotated TAIR IDAT1G53120.1
Annotated Gene NameRNA-binding S4 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19792798-19794605 | Forward length=320
E-Value2.2E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7161956244014
Replicate 28.0287666141252
Replicate 310.694604356171
Condition 2: 8 Hour
Replicate 113.5018743428
Replicate 211.318302122465
Replicate 311.036311629798
Condition 3: 24 Hour
Replicate 16.9800219437401
Replicate 26.1017954244012
Replicate 311.043972106382


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125468.p1 GENE.S_Transcript_125468~~S_Transcript_125468.p1 ORF type:complete len:338 (+),score=44.80,S4|PF01479.21|4.4e+03,S4|PF01479.21|3.1e-06 S_Transcript_125468:132-1145(+)
ATGAGCAGCGTAATAGGAAGAGTAAACGCCATAGCCACTAATATTCTCCAGGCCACAGCTACTCCGGTCAGGAGGATAGGACTTCTTCAATCCCATTCTTATTATCATCATGTATTTCCTCGCCACACTTTTCTCTCTCCTCCAAACTCACCATTTCGTTCACTTTCTCTTTCATCCTCACCAGAAACTTATTCTACCCCAGAGACGTGCCACTTGGTACAAGCTACAAGGAGTGAAGTGGATGTTTTACTCAAAGGGGTCAATGATAAAGTTGTAGCTGAAGAAGTCAAGTATATTCTTGAAATGGCTAACCGGGCATCAGAGAGAAGAGAGGTCGTGCACACAGACTTTCTTATCCCACCTATATGGAATGAAGCTATGGTAGCCCTGAAAAAATTAGTTGATGTCAATGCTATTCCTAATGGAGGATATCCAGAGGCAGAGCGCTGTCGACTTTCAGTTGGACATCCACAAGTTCTCACAACCGCTCGTGATACAATTGCAGCATTGAGCATCACAGGGAATTTTGGATTTCAACCAACGTCTCATAGTGACTTTCTTGGCTCAATTCTAGGCACGGGAATTTCCAGAGCAAAGCTTGGTGATATTATCCTTCAGGGAGAGAAGGGGGCTCAAGTCATGATTGTTCCTGAGCTTGTTGATTATATTATGTCGACATTGGATAAGGTTGGTAAAGTTCCAGTCTCTTGTACATTGATTCGTTTGGACGAAATAGAGTATGAGCCTCCAAGCACAAAGACTTTCAAGACTGTAGAGTCGTCATTAAGAGTTGATGCTTTAGCCAGTGCTGGATTTAAACTTTCACGATCGAAATTTGCTGAGCTGATAAGCAAAGGAGATGTCCGCATTAACTGGAGCACTGTAATGAAAAATGGTTCGACACTCAAGACTGGTGATATTGTCTCAGTTAGTGGACAAGGAAGATTAAAGATCGGAGAAATAAATACGACAAAGAAGGGAAAATATTCAGTTGAACTTATACGATACATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125468.p1 GENE.S_Transcript_125468~~S_Transcript_125468.p1 ORF type:complete len:338 (+),score=44.80,S4|PF01479.21|4.4e+03,S4|PF01479.21|3.1e-06 S_Transcript_125468:132-1145(+)
MSSVIGRVNAIATNILQATATPVRRIGLLQSHSYYHHVFPRHTFLSPPNSPFRSLSLSSSPETYSTPETCHLVQATRSEVDVLLKGVNDKVVAEEVKYILEMANRASERREVVHTDFLIPPIWNEAMVALKKLVDVNAIPNGGYPEAERCRLSVGHPQVLTTARDTIAALSITGNFGFQPTSHSDFLGSILGTGISRAKLGDIILQGEKGAQVMIVPELVDYIMSTLDKVGKVPVSCTLIRLDEIEYEPPSTKTFKTVESSLRVDALASAGFKLSRSKFAELISKGDVRINWSTVMKNGSTLKTGDIVSVSGQGRLKIGEINTTKKGKYSVELIRYI*

Click here to download the sequence:
Link to NCBI Protein BLAST