Transcript Information: S_Transcript_12548.p1


Annotated TAIR IDAT4G31480.1
Annotated Gene NameCoatomer, beta subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15264145-15267384 | Forward length=948
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.839910830553
Replicate 253.243009499996
Replicate 352.380473356262
Condition 2: 8 Hour
Replicate 158.302854705095
Replicate 255.635564703421
Replicate 361.549229782627
Condition 3: 24 Hour
Replicate 146.997509591752
Replicate 244.89865511024
Replicate 347.049323632677


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12548.p1 GENE.S_Transcript_12548~~S_Transcript_12548.p1 ORF type:complete len:951 (+),score=196.31,Adaptin_N|PF01602.16|4.8e-89,Coatomer_b_Cpla|PF14806.2|7.7e-61,Coatamer_beta_C|PF07718.8|6.6e-61,HEAT_2|PF13646.2|0.0002,HEAT_2|PF13646.2|0.27,HEAT_2|PF13646.2|6.9 S_Transcript_12548:216-3068(+)
ATGGAGAAAACTTGCACATTATTAGTCCACTTTGATAAGGGGACACCGGCATTGGCGAATGAGATTAAAGAGGCATTGGAGGGTAATGATGTCCTTGCAAAAGTGGAGGCAATGAAGAAGGCAGTCATGCTTTTGTTGAATGGTGAGACGATCCCGCAATTGTTCATCACTATTATTCGGTATGTTTTGCCCTCTGAAGACCACACGATTCAGAAGCTTTTGTTGCTTTACTTGGAGATCATTGATAAGACTGATTCCCAAGGGCGTTTGCTTCCTGAAATGATTCTGATCTGTCAAAACCTAAGGAATAACCTACAGCACCCGAATGAGTATCTTCGTGGTGTAACACTTAGGTTCCTTTGTCGATTGAATGAAACTGAGATTATCGAGCCTTTGATCCCGTCTGTGTTGACTAATTTAGAACATAGGCACCCCTTTGTTAGGAGGAATGCTATACTAGCTGTTATGTCTATATATAAGCTGCCACAGGGGGAGCAGCTATTGGGTGATGCCCCTGAGACCATTGAGAAGGTTCTTTCAACGGAGCAAGATCCCTCAGCCAAGAGGAATGCATTCCTTATGCTGTTCACATGTGCTCAAGAGAGGGCTGTTAGCTACCTATTTACCCACATTGATCAGATTTTGGATTGGGGTGAGCAGCTACAGATGGTGGTTTTGGAGTTGATCCGTAAAGTTTGTCGGACCAACAAGAATGAGAAGGGGAAGTACATTAAGATTATCATCTCTCTTCTCACCGCCCCTTCGACAGCCGTCATATACGAGTGTGCTGGGACTCTTGTCTCTCTATCTTCGGCACCTACGGCTATTAGGGCGGCCGCAGATACTTACTGCAAGCTTTTGCAGTCACAAAGTGACAACAATGTTAAGCTTATTGTGCTTGATAGGCTCCAGGAGTTGAAGTCTTTACACAAAGAGATAATGGTCGAAATGATAATGGATATTCTCCGCGCTCTTTCGAGTCCCAATCTTGACATCAGGAGGAAGACCCTGGATATTGCCCTTGAGTTGATTACTCCTAGGAATGTTGACGAAGTGGTTCTCTTGTTGAAGAAGGAGGTTGTGAAGACCCAAAGTGCTGATCTGGAGAAGAATGGAGAGTACCGGCAAATGCTTGTTCAGGCCATTCATACCTGTGCTATGAAATTCCCTGAGGTGGCCAGTACAGTTGTCCATGTGCTCATGGATTTCCTTGGGGACACCAATGTGGCTTCAGCTATGGATGTTGTTGTCTTTGTGCGGGAGATTATTGAGACAAACCCCAAGTTGCGGGTTTCTATCATAACAAGGCTGCTAGACACGTTCTACCAAATCCGTGCTGCTAGGGTCTGTTCATGTGCTCTTTGGATCATTGGGGAGTATTGTCTCTCGCTCTCTGAAGTTGAGAGTGGAACTGCGACAATTAAGCAGTGTCTTGGTGATCTTCCATTTTACACGGTCACCGAGGAAGGAGAGGCCCAAGAGGTAGCTCCAAAAGCTAACCAGGCAGCAAGCGCAACCACCGTGTCCTCTAGAAGGCCTGTGGTCCTTGCAGACGGCACTTATGCCACCCAGAGTGCTGCGTTAGAAACTGCTATGTCACCACCTACCCTTGTTCAGGGGTCATTGGCTTCTCAAGGGAATTTGAGATCACTGCTTCTTTCTGGTGACTTCTTCCTTGGGGCTGTTGTTGCATGCACCTTGACAAAGCTTGTTTTGAGGTTGGAAGAGGTTCAACCTTCCAAGGTTGAGGTGAACAAAGCAACAACCCAGGCTTTATTATATATGGTATCTATGATTCAGCTGGGACAATCCCCTGTTCTTCCGCACCCTATTGACAATGATTCCTATGATAGGATAATTCTTTGCATCAGACTTTTGTGCAACACTGGTGGTGAGAATAGAAAGATATGGCTTCACTCTTGCAGAGAAAGCTTTGTTAACATGCTTGCAGATAAGCAATTCCGTGAGACTGAGGAAAGGAAGGCAAAGGCTCAGATTTCTCATGCACAGCCTGACGACCTTATTGATTTCTACCATTTGAAGAGCAGGAAGGGCATGAGCCAGCTTGAATTGGAAGATGAAGTCCAAGATGATTTGAAGCGTGCTACTGGAGAATTTACAAAGGACAATGATGATGCTAATAAACTCAACCGTATTCTTCAGCTTACAGGATTTAGTGACCCTGTTTATGCTGAAGCTTATGTGACAGTTCATCACTATGACATTGTTCTTGATGTAACTGTTATCAATAGAACAAAGGAGACCTTACAGAATTTATGCTTGGAGTTGGCAACCATGGGTGATCTGAAACTGGTGGAGCGTCCACAGAATTATACACTAGCACCAGAGTCAAGTAAACAAATCAGAGCTAACATAAAGGTCTCCTCAACTGAAACAGGTGTTATATTTGGAAATATAGTCTACGAGACTTCAAATGTTCTTGAACGCAATGTTGTTGTCCTCAATGACATTCACATTGACATAATGGATTACATTTCTCCTGCTACCTGTGCTGATGTTGCATTCAGAACTATGTGGGCCGAGTTTGAATGGGAAAATAAGGTTGCTGTAAATACCGTAATTCTAGACGAGAAGGAATTCCTAGAGCACATCATCAAGTCGACAAACATGAAGTGTCTCACTCCACCATCGGCCTTGGAAGGAGAGTGCGGATTCCTTGCTGCTAACTTGTATGCAAAGAGTGTCTTCGGTGAGGATGCTTTGGTAAACGTCAGTGTCGAGAAGCAATCCGATGGCAAGCTTAGTGGTTATATCAGAATAAGAAGTAAAACGCAAGGCATTGCCCTCAGTCTAGGGGACAAGATCACTCTTAAACAGAAGGGAGCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12548.p1 GENE.S_Transcript_12548~~S_Transcript_12548.p1 ORF type:complete len:951 (+),score=196.31,Adaptin_N|PF01602.16|4.8e-89,Coatomer_b_Cpla|PF14806.2|7.7e-61,Coatamer_beta_C|PF07718.8|6.6e-61,HEAT_2|PF13646.2|0.0002,HEAT_2|PF13646.2|0.27,HEAT_2|PF13646.2|6.9 S_Transcript_12548:216-3068(+)
MEKTCTLLVHFDKGTPALANEIKEALEGNDVLAKVEAMKKAVMLLLNGETIPQLFITIIRYVLPSEDHTIQKLLLLYLEIIDKTDSQGRLLPEMILICQNLRNNLQHPNEYLRGVTLRFLCRLNETEIIEPLIPSVLTNLEHRHPFVRRNAILAVMSIYKLPQGEQLLGDAPETIEKVLSTEQDPSAKRNAFLMLFTCAQERAVSYLFTHIDQILDWGEQLQMVVLELIRKVCRTNKNEKGKYIKIIISLLTAPSTAVIYECAGTLVSLSSAPTAIRAAADTYCKLLQSQSDNNVKLIVLDRLQELKSLHKEIMVEMIMDILRALSSPNLDIRRKTLDIALELITPRNVDEVVLLLKKEVVKTQSADLEKNGEYRQMLVQAIHTCAMKFPEVASTVVHVLMDFLGDTNVASAMDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGTATIKQCLGDLPFYTVTEEGEAQEVAPKANQAASATTVSSRRPVVLADGTYATQSAALETAMSPPTLVQGSLASQGNLRSLLLSGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKATTQALLYMVSMIQLGQSPVLPHPIDNDSYDRIILCIRLLCNTGGENRKIWLHSCRESFVNMLADKQFRETEERKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDNDDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIRANIKVSSTETGVIFGNIVYETSNVLERNVVVLNDIHIDIMDYISPATCADVAFRTMWAEFEWENKVAVNTVILDEKEFLEHIIKSTNMKCLTPPSALEGECGFLAANLYAKSVFGEDALVNVSVEKQSDGKLSGYIRIRSKTQGIALSLGDKITLKQKGAA*

Click here to download the sequence:
Link to NCBI Protein BLAST