Transcript Information: S_Transcript_125580.p2


Annotated TAIR IDATCG00270.1
Annotated Gene Namephotosystem II reaction center protein D
Annotated Gene Symbol(s)PSBD
Annotation TypeOrtholog
Chromosome PositionchrC:32711-33772 | Forward length=353
E-Value8.3E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1167.57169421813
Replicate 2127.39079620215
Replicate 3210.78901184816
Condition 2: 8 Hour
Replicate 1189.0971757217
Replicate 2205.07527919749
Replicate 3202.38012372978
Condition 3: 24 Hour
Replicate 1204.2558315081
Replicate 2173.0516460194
Replicate 3238.11319887542


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125580.p2 GENE.S_Transcript_125580~~S_Transcript_125580.p2 ORF type:complete len:354 (+),score=11.88,Photo_RC|PF00124.15|1.1e-75 S_Transcript_125580:1755-2816(+)
ATGACTATAGCCATTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCCGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGAGGCCTGTGGACCTTTGTTGCTCTTCATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTAGATCCGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCTTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCACCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGTGTCTTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCGATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATTCGTGCAGCTGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125580.p2 GENE.S_Transcript_125580~~S_Transcript_125580.p2 ORF type:complete len:354 (+),score=11.88,Photo_RC|PF00124.15|1.1e-75 S_Transcript_125580:1755-2816(+)
MTIAIGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST