Transcript Information: S_Transcript_125652.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11551198721212
Replicate 30.38623531065132
Condition 2: 8 Hour
Replicate 10.22330251640977
Replicate 20.35139029277057
Replicate 30.33480388908348
Condition 3: 24 Hour
Replicate 10.68622670651081
Replicate 20.1186586993526
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125652.p1 GENE.S_Transcript_125652~~S_Transcript_125652.p1 ORF type:internal len:191 (+),score=31.36,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|3e-07 S_Transcript_125652:2-571(+)
AATACGGGCTTCTTCAGAATGGGTGGGACACCTTGGCTTCTAATGTCTCCTTTGCTTGTTCTTGGAAGTTTGTCACTCAGGTATCGTCTTTGTTTTTTCCCTTTGGTCAAGTTTAATGTTGGGGATGGTTCTCGAAGTAGGTTTTGGAAGGATGTTTGGGTTGAGGTGGAGCCGTTTTCCACACGGTTTCCTCGGGTGTTTGGCCTATCTACTTTACATGATGCCCCTATCTTCTCTTTATTCTCTGCACATCAGAATAGCTGGGACCTTCATCTTCGAAGGAACCCTCTTGATTGGGAAGTTGATGAGTTGGTTTCCATTGTGAGTCTTTTGGATACTATCCATCTTGGGGGTGGGGTGGATTCTAGGACCTGGTTGGGGGACTCCACTGGCACGTTCTCGTGCAAGTCCTTTCTTCGCCAGCTTGACCCTCTTCCTAATCCCTCCCCTTTCCCTATGGCCCCTGTTATTTGGAAGGCCAAAGTGCCCTCTAAGGTGCGTGCTTTTTTGTGGACAGTGGCTTTGGATAGAGTTAATACTCATGATGTTCTGCAGAGACGTTTCCCGCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125652.p1 GENE.S_Transcript_125652~~S_Transcript_125652.p1 ORF type:internal len:191 (+),score=31.36,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|3e-07 S_Transcript_125652:2-571(+)
NTGFFRMGGTPWLLMSPLLVLGSLSLRYRLCFFPLVKFNVGDGSRSRFWKDVWVEVEPFSTRFPRVFGLSTLHDAPIFSLFSAHQNSWDLHLRRNPLDWEVDELVSIVSLLDTIHLGGGVDSRTWLGDSTGTFSCKSFLRQLDPLPNPSPFPMAPVIWKAKVPSKVRAFLWTVALDRVNTHDVLQRRFPR

Click here to download the sequence:
Link to NCBI Protein BLAST