Transcript Information: S_Transcript_125757.p1


Annotated TAIR IDAT3G51280.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19037229-19038781 | Forward length=430
E-Value3.4E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8294056122866
Replicate 23.2352766764584
Replicate 33.9064043843064
Condition 2: 8 Hour
Replicate 14.6907172184325
Replicate 24.0551823399912
Replicate 34.9925101315129
Condition 3: 24 Hour
Replicate 12.1800392892854
Replicate 22.2156068343476
Replicate 32.5684362938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125757.p1 GENE.S_Transcript_125757~~S_Transcript_125757.p1 ORF type:complete len:491 (+),score=126.79,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|9.6e+02,TPR_1|PF00515.24|1.9e-08,TPR_1|PF00515.24|0.034,TPR_1|PF00515.24|3.1e+03,TPR_1|PF00515.24|3.7e+03,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|9.9e-08,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|8.4e+03,TPR_2|PF07719.13|6.8e+03,TPR_19|PF14559.2|0.89,TPR_19|PF14559.2|2.1e+03,TPR_19|PF14559.2|5.8e-09,TPR_19|PF14559.2|1.3e+03,TPR_11|PF13414.2|14,TPR_11|PF13414.2|9.6e-10,TPR_12|PF13424.2|6.1,TPR_12|PF13424.2|0.00034,TPR_12|PF13424.2|0.43,TPR_8|PF13181.2|5.8e+03,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|3.5e+03,TPR_8|PF13181.2|5.9e-05,TPR_8|PF13181.2|2,TPR_8|PF13181.2|3e+03,TPR_14|PF13428.2|5.9e+03,TPR_14|PF13428.2|2.8,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|0.0013,TPR_14|PF13428.2|77,TPR_10|PF13374.2|90,TPR_10|PF13374.2|0.00082,TPR_10|PF13374.2|1.3,TPR_16|PF13432.2|67,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|0.00056,TPR_16|PF13432.2|1.2e+02,TPR_7|PF13176.2|3.9e+03,TPR_7|PF13176.2|7e+03,TPR_7|PF13176.2|0.00089,TPR_7|PF13176.2|41,TPR_6|PF13174.2|72,TPR_6|PF13174.2|0.73,TPR_6|PF13174.2|1.3,TPR_6|PF13174.2|1.3e+04 S_Transcript_125757:78-1550(+)
ATGATGCAAGAAATGTGGAATGCTCCTCCTGGATTCAGGCCTTCAAAGTCTGCATCTGCTCCTTGCTCTCCAGCAAAGCCCCTTGCTGTCTCTCGAACCCGCTCCGAGTCCTTCCACGTCACCCACAAAGTCCCTGTTGGTGACACTCCTTATGTTCGAGCCAAGCATGTCCAGTTGGTTGATAAAGACCCAGAGAAGGCAATTCCTTTGTTTTGGGCAGCTATTAATGCTGGAGATAGAGTGGATAGTGCCCTTAAGGATATGGCCATTGTTATGAAGCAACAAAATCGGGCTGAAGAGGCTATTGAAGCCATTAAATCACTTCGTAGTCGTTGCTCTGATCAGGCCCAGGAATCTCTTGACAACATCTTACTTGATCTCTACAAGAGATGTGGGAGATTGGATGATCAAATAGCACTACTGAGACACAAACTATTCTTGATTCAACAAGGCCTGGCCTTCAATGGGAAGCGAACTAAAACAGCTCGATCTCAAGGGAAGAAGTTTCAGGTCTCAGTTGAGCAAGAAGCCACTCGTTTGCTGGGAAATTTAGGATGGGCACTAATGCAGCAAAACAACTACATAGAAGCAGAGGATGCTTATAGAAGAGCATTGTCAATTGCACCAGATAACAACAAGATGTGCAATTTGGGGATTTGCCTGATGAAGCAAGGGAGGATCACCGAGGCCAAAGAGACCCTCCGGCGAGTGAAACCGGCAGTGGCAGATGGGCCCAGAGGAATGGATTCTCACCTCAAGGCCTATGAAAGAGCCCAACAAATGCTTGCAGATTTGGAATCAGAATTGATGAAGAAAGCAGGGGACTCTGTTTCAGAACAGAGCAGGGTTTTCAATGCTTTATTGGGATCTTCCTCTATTTGGCAACCTCAACCTTGTAGAGAAACATTTTCCTTACCACCAAACACCAAACCCCAGGAAGATTTCCCAGATGAAAACACAAATTCCAATATCTTGCCAAGCAATAATGGTAGTATTAGCGGTAATCTAAATTTCCCACCTAAGCCAATTGGTGGTGGTAGCTTCTTCTCTCTTGCAAATTCTTTGAACATTGATGCACCACCATACTACTCAACCAAATGTATGAGGGAGCCATTGGGAGTCACTCAATTTACTGAGACCCTTAAGCGGACGAGGTCTGGGCATCTCGGGAGGGACAACAACAAACAAGGAGGGGAGACTAACAAGATTAGTAATCATAATATTAGTACTAATAAGGAGAGGGAGAATAAGATGATGAGGAGATCACTTTCATTTGAGGAGCCTCTGGATAAAACACTAGATTTTCTGCCAGATGAGAAGGACTTTGAAGAGGCTATTATTTCTGCAGTCCTGAGCACAATTGATTCTGAGAACAACAAGAAGTCCAAGAAGGTTGAACTGAAGCCTTCTGCAACTGACAAAAGATTGAAGGTTTTTCAGGATATAACATTGTCCTTGAGTCCTAGAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125757.p1 GENE.S_Transcript_125757~~S_Transcript_125757.p1 ORF type:complete len:491 (+),score=126.79,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|9.6e+02,TPR_1|PF00515.24|1.9e-08,TPR_1|PF00515.24|0.034,TPR_1|PF00515.24|3.1e+03,TPR_1|PF00515.24|3.7e+03,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|9.9e-08,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|8.4e+03,TPR_2|PF07719.13|6.8e+03,TPR_19|PF14559.2|0.89,TPR_19|PF14559.2|2.1e+03,TPR_19|PF14559.2|5.8e-09,TPR_19|PF14559.2|1.3e+03,TPR_11|PF13414.2|14,TPR_11|PF13414.2|9.6e-10,TPR_12|PF13424.2|6.1,TPR_12|PF13424.2|0.00034,TPR_12|PF13424.2|0.43,TPR_8|PF13181.2|5.8e+03,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|3.5e+03,TPR_8|PF13181.2|5.9e-05,TPR_8|PF13181.2|2,TPR_8|PF13181.2|3e+03,TPR_14|PF13428.2|5.9e+03,TPR_14|PF13428.2|2.8,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|0.0013,TPR_14|PF13428.2|77,TPR_10|PF13374.2|90,TPR_10|PF13374.2|0.00082,TPR_10|PF13374.2|1.3,TPR_16|PF13432.2|67,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|0.00056,TPR_16|PF13432.2|1.2e+02,TPR_7|PF13176.2|3.9e+03,TPR_7|PF13176.2|7e+03,TPR_7|PF13176.2|0.00089,TPR_7|PF13176.2|41,TPR_6|PF13174.2|72,TPR_6|PF13174.2|0.73,TPR_6|PF13174.2|1.3,TPR_6|PF13174.2|1.3e+04 S_Transcript_125757:78-1550(+)
MMQEMWNAPPGFRPSKSASAPCSPAKPLAVSRTRSESFHVTHKVPVGDTPYVRAKHVQLVDKDPEKAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLFLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRITEAKETLRRVKPAVADGPRGMDSHLKAYERAQQMLADLESELMKKAGDSVSEQSRVFNALLGSSSIWQPQPCRETFSLPPNTKPQEDFPDENTNSNILPSNNGSISGNLNFPPKPIGGGSFFSLANSLNIDAPPYYSTKCMREPLGVTQFTETLKRTRSGHLGRDNNKQGGETNKISNHNISTNKERENKMMRRSLSFEEPLDKTLDFLPDEKDFEEAIISAVLSTIDSENNKKSKKVELKPSATDKRLKVFQDITLSLSPRA*

Click here to download the sequence:
Link to NCBI Protein BLAST