Transcript Information: S_Transcript_12578.p1


Annotated TAIR IDAT5G11700.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3762961-3771123 | Reverse length=1476
E-Value1.4E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.396257807597
Replicate 28.1433472186535
Replicate 312.110466183652
Condition 2: 8 Hour
Replicate 110.52540723807
Replicate 29.2175857056384
Replicate 39.1484324484898
Condition 3: 24 Hour
Replicate 111.719358095812
Replicate 27.8788357840521
Replicate 38.9846767623375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12578.p1 GENE.S_Transcript_12578~~S_Transcript_12578.p1 ORF type:3prime_partial len:233 (+),score=32.22 S_Transcript_12578:443-1138(+)
ATGTCGAAATTTCGCTCGGTTTTGTCCCTCCTCTTTCTTCTCTTCTTCGTGAACCCTAGGTTTTCTTTCGTATCGTCGATTTCGCTGGATAATGAAGATGATGAATCAGAATCATCGACGAGGAGTATGCTACTATTCCATCAGGATTACTCGCCGCCATCGCCTCCGCCACCGCCGCCACATCCACCAACAGTATCATGTGAAGGAGATCTAGACGGTGTAGGTTCACTAGACACTACTTGTCAAATAGTATCCGATTTGAATCTCACTGATAGTGTGTATATACAAGGGAAGGGCAATTTTTTCATCCTCCCTAATGTGAAACTCAACTGTTCTTCACTTCCTGGTTGTGAGATTACCATCAATGTCACTGGTAACTTTAGTTTAGGTGAGAATTCTTCCATTATTGCTGGCACTTTTGAATTAGCTGCTTGGAATGCAACCCTAGGGTCCGGTTCTTTGATTAACACCACCGGTTTGGCCGGGGATCCCCCATCTCAAACCAGTGGGACCCCTCATGGGGAGGACGGGGCTGGTGGGGGCCACGGGGGCCGTGGTGCGTGTTGTTTGATGGATGATTCCAAGCAGCCTGAGGATATTTGGGGCGGAGATACCTACTCATGGTCCTCGTTGGATGAGCCTTGGAGTTATGGGAGTAAAGGAGGGACGACGAATAAGGAGATGGATTATGGTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12578.p1 GENE.S_Transcript_12578~~S_Transcript_12578.p1 ORF type:3prime_partial len:233 (+),score=32.22 S_Transcript_12578:443-1138(+)
MSKFRSVLSLLFLLFFVNPRFSFVSSISLDNEDDESESSTRSMLLFHQDYSPPSPPPPPPHPPTVSCEGDLDGVGSLDTTCQIVSDLNLTDSVYIQGKGNFFILPNVKLNCSSLPGCEITINVTGNFSLGENSSIIAGTFELAAWNATLGSGSLINTTGLAGDPPSQTSGTPHGEDGAGGGHGGRGACCLMDDSKQPEDIWGGDTYSWSSLDEPWSYGSKGGTTNKEMDYGG

Click here to download the sequence:
Link to NCBI Protein BLAST