Transcript Information: S_Transcript_125794.p1


Annotated TAIR IDAT5G51350.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20867860-20870621 | Reverse length=895
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1627671834964
Replicate 24.3078370117693
Replicate 33.8596448761796
Condition 2: 8 Hour
Replicate 13.6807577677899
Replicate 22.9201657879255
Replicate 33.9320495582004
Condition 3: 24 Hour
Replicate 12.969207464741
Replicate 23.5694892018843
Replicate 33.1289483350468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_125794.p1 GENE.S_Transcript_125794~~S_Transcript_125794.p1 ORF type:complete len:927 (+),score=193.50,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|0.0006,LRR_8|PF13855.2|43,LRR_8|PF13855.2|0.4,LRR_8|PF13855.2|0.00049,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|4.8e-09,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|41,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|2.3e-06,LRR_4|PF12799.3|0.0086,LRR_4|PF12799.3|76,LRR_4|PF12799.3|43,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.00097,LRR_4|PF12799.3|0.0036,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|33,LRR_4|PF12799.3|45,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.59,Pkinase_Tyr|PF07714.13|3.7e-16,Pkinase|PF00069.21|2.6e-13,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|27,LRR_1|PF00560.29|57,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.022,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|26,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.2e+03,LRRNT_2|PF08263.8|4.6e-06 S_Transcript_125794:186-2966(+)
ATGGAGATTTCACTAAGCTTCTTCTTGTGCTTAAATTTTGTTTTTCTCGTATCCATGTTTGTCCCAGAAGCAGTTGGAGCTACAGATGTGTTTACTGATGCACTCTTGAGCTTGAAATCTGAGGTTGTTGATCATTACAATGGTTTGGGTGACTGGCTTGTGCCTTCTAGGAAAAACCCACATGAAGAAATAGTGGCTTGTTCTTGGTCAGGTGTTTCTTGCAATAGTAACTCCACTATGGTCATTGGGTTAGACCTCTCAAGAAGAGGCCTTTCTGGTGAAATTTCTGGTACTCAATTTGACGTCTTTGGTGACCTTGTCAACCTCAATCTTAGTCATAATTTGTTTTCTGGAGAGCTTCCTGTTTCTATCTTCAATCTCACTAACTTAAGAAGCTTAGACATTAGTAGGAACAATTTTTCTGGTCATTTCCCAAGTGGGGCTTCTGGGCTTCAGAAGCTTATTGTGCTTGATGCTTTTAGTAACAGTTTCTCAGGTCCACTACCAGTTGAAGTTTCCCAGATTGAGTCACTGAAAGTTCTCAATTTCGCTGGGAGTTACTTCAGTGGACCAATCCCTTCAGAATATGGCAACTTTAGGAGCTTAGAATACATTCAATTAGCTGGGAATTTTCTTGGTGGTGAAATTCCTCCTGACCTGGGAAAGCTTCAAACAATGACTCATATGGAAATTGGGTACAATTCTTACAAAGGAGGCATCCCTTGGCAACTGGGTAACATGAGTCAGCTTCAGTATCTTGATATTGCTGGTGCTAATCTCTCAGGTCCAATCCCAAAAGAGCTTAGCAATTTGACTAAACTTGAGTCTCTTTTTCTCTTCAGAAACCAGCTTAATGGGGAAATCCAATCAGAGTTCAGTAAGTTAGTTTCTCTCAAGAGTTTGGATCTTTCTGACAATCAACTTTCTGGAGAAATCCCAGAGAGCTTTTCTGAGCTGAAGAATCTAAGTTTGCTCAGCCTAATGTACAATCAAATGAGTGGCATTGTTCCACAAGCTATAGGTGATCTTCCCATGTTAGAAACTCTTCTCATATGGGACAACTTCTTCTCTGGTTCTCTTCCACGTAACTTGGGAATCAACTCAGAGCTGAAATTGGTGGATGTTTCAACAAACAATCTCAGTGGAAGCATTCCACCTAATTTATGTGCTAATGGCATGCTCTCCAAGGTCATATTGTTCTCTAACAATTTTACGGGTGAGCTTCCCCTGTCTCTCTCAAATTGTTCATCTCTGGTTCGAATTCGATTCGAAGATAATTCTCTCTCGGGTCCTATTTCTCTCAACTTTAACACCCTTTCTGATATCTCTTATGTTGATTTATCAAGAAACAAGTTCATTGGTGGTGTTCCTGAGGCTATTACTCAAGCTTCTAAGCTTGAGTACTTTAATGTGTCCGGCAATCCAGAGCTTGGTGGTAGTCTTCCACCAAGTTTATGGTCATTACCAGTTCTTCAGAACTTTTCTGCTTCCTATTGCAATATATCAGGCAATATCCCCCCTTTCCCATATTGCGAATCTCTTAAAGTCATGGAACTCAGTTCAAATCACCTATCAGGAGAAATTCCCGAGTCTATCTCAGATTGTCAGGATATAAGTATCATAGACCTATCTCATAATAATCTCAGTGGTTCAATACCAAAACAGTTGGGGCATTTCACAAGTTTACAAGTGTTTAATGTGTCATTCAATGGTTTGTCAGGCTCAGTTCCACATGGCAACATGTTCAGATTGATGGGCAGCAGTGCCTTTGTGGGGAACCCCAAGTTATGTGGGTTCCCATTGCACCCATGCCCCCCAGGTGAAACACAATTGGTGTGGGTGTTAATTCTATGTGCTGCAGTTGTTGCTTTCATAGCCCTTGCTGTTTCTGGGGTATTCTATATCCAGAAAGGGAGGAGAAAAAGTCAATGGAAAATGGTGTCCTTTAGTGGATTACCTAAATTCACTGCCGATGATGTTCTAAAGAACTTTGATTCTTTGGAACCAATGCCTTATTCATTAGCAGCATCTCCCATCTGCAAAGTTACACTACCAACAGGGATCACAGTGTCAGTGAAGAAGATTGAATGGGACCTACAGCATTTCAAGGCTATGGAAGAGTACATCATCCAGATGGGGAATGCAAGGCACATGAACCTAACTAGATTGCTTGGGTATTGTTACAACAAGGATCTTGTCTATCTTCTATACGATTACTTGCCCAATGGAACTTTGGCTGACAAGATTTCCATGAAGCGGGATTGGGTTTCTAAGTTCAAGGTAGTGATGGGCATTGCAAAAGGGCTCTGTTTCCTTCATCATGAATGCTACCCAGCAATTCCTCATGGTGATTTGAGGATGAGTAATGTTGTTTTCAATGAAAAGATGGAGCCCCAGTTAGCCGAATTTGGTTTCCGATTCTTGATGCAACTCAACAAAGGTTTCTTTCCATCAACATTCTCCAAGATGCAAGGAGGTCAATTTCAAGCTGCAGTGAAAGAGGAGCTGTACATGGACGTCTATAACTTCGGGGCAATCATCCTTGAAATCTTAACTGATGGAAGGATGAAAAGTGCGGGTCAGAACCTGCAGATCAAGCCAAATGAAGCTCTCTTGGAAGAGATACGCTGTGCAAATGAAGCCGGTCCTCAATATTCCTCCATGAAGCAAATAAATGTGGTGCTTGAAGTTGCTTTACGCTGCACCAGAGACAGATCATCAGAAAGGCCATCAATGGAGGATGTGTTGAAGATGTTATCTGCATCAAATACCCGAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_125794.p1 GENE.S_Transcript_125794~~S_Transcript_125794.p1 ORF type:complete len:927 (+),score=193.50,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|0.0006,LRR_8|PF13855.2|43,LRR_8|PF13855.2|0.4,LRR_8|PF13855.2|0.00049,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|4.8e-09,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|41,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|2.3e-06,LRR_4|PF12799.3|0.0086,LRR_4|PF12799.3|76,LRR_4|PF12799.3|43,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.00097,LRR_4|PF12799.3|0.0036,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|33,LRR_4|PF12799.3|45,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.59,Pkinase_Tyr|PF07714.13|3.7e-16,Pkinase|PF00069.21|2.6e-13,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|27,LRR_1|PF00560.29|57,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.022,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|26,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.2e+03,LRRNT_2|PF08263.8|4.6e-06 S_Transcript_125794:186-2966(+)
MEISLSFFLCLNFVFLVSMFVPEAVGATDVFTDALLSLKSEVVDHYNGLGDWLVPSRKNPHEEIVACSWSGVSCNSNSTMVIGLDLSRRGLSGEISGTQFDVFGDLVNLNLSHNLFSGELPVSIFNLTNLRSLDISRNNFSGHFPSGASGLQKLIVLDAFSNSFSGPLPVEVSQIESLKVLNFAGSYFSGPIPSEYGNFRSLEYIQLAGNFLGGEIPPDLGKLQTMTHMEIGYNSYKGGIPWQLGNMSQLQYLDIAGANLSGPIPKELSNLTKLESLFLFRNQLNGEIQSEFSKLVSLKSLDLSDNQLSGEIPESFSELKNLSLLSLMYNQMSGIVPQAIGDLPMLETLLIWDNFFSGSLPRNLGINSELKLVDVSTNNLSGSIPPNLCANGMLSKVILFSNNFTGELPLSLSNCSSLVRIRFEDNSLSGPISLNFNTLSDISYVDLSRNKFIGGVPEAITQASKLEYFNVSGNPELGGSLPPSLWSLPVLQNFSASYCNISGNIPPFPYCESLKVMELSSNHLSGEIPESISDCQDISIIDLSHNNLSGSIPKQLGHFTSLQVFNVSFNGLSGSVPHGNMFRLMGSSAFVGNPKLCGFPLHPCPPGETQLVWVLILCAAVVAFIALAVSGVFYIQKGRRKSQWKMVSFSGLPKFTADDVLKNFDSLEPMPYSLAASPICKVTLPTGITVSVKKIEWDLQHFKAMEEYIIQMGNARHMNLTRLLGYCYNKDLVYLLYDYLPNGTLADKISMKRDWVSKFKVVMGIAKGLCFLHHECYPAIPHGDLRMSNVVFNEKMEPQLAEFGFRFLMQLNKGFFPSTFSKMQGGQFQAAVKEELYMDVYNFGAIILEILTDGRMKSAGQNLQIKPNEALLEEIRCANEAGPQYSSMKQINVVLEVALRCTRDRSSERPSMEDVLKMLSASNTRV*

Click here to download the sequence:
Link to NCBI Protein BLAST