Transcript Information: S_Transcript_126018.p1


Annotated TAIR IDAT1G21550.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7553317-7553784 | Reverse length=155
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9798754631927
Replicate 26.6648010121659
Replicate 34.3225162695939
Condition 2: 8 Hour
Replicate 14.2206501669326
Replicate 21.9808407649758
Replicate 34.6628416635897
Condition 3: 24 Hour
Replicate 17.9642804392791
Replicate 210.859743047
Replicate 39.0641722080886


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126018.p1 GENE.S_Transcript_126018~~S_Transcript_126018.p1 ORF type:complete len:192 (+),score=43.38,EF-hand_1|PF00036.28|0.0012,EF-hand_1|PF00036.28|1.9e+03,EF-hand_1|PF00036.28|4.4e+02,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|6.6e-08,EF-hand_5|PF13202.2|0.023,EF-hand_5|PF13202.2|6.1e+03,EF-hand_5|PF13202.2|9.4e+02,EF-hand_5|PF13202.2|7.6e-08,EF-hand_5|PF13202.2|0.0002,EF-hand_6|PF13405.2|0.0061,EF-hand_6|PF13405.2|1.4e+04,EF-hand_6|PF13405.2|3.7e-06,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|0.012,EF-hand_7|PF13499.2|1e-06,EF-hand_7|PF13499.2|6.1e-08,EF-hand_8|PF13833.2|0.058,EF-hand_8|PF13833.2|0.019,EF-hand_8|PF13833.2|0.15 S_Transcript_126018:257-832(+)
ATGGTTCTACACCATACCAAATCAAAATCTCAACATATATTTATGCCTTCATATCATAATCACCTTCTTGTTAACTCTCCTAAGATTTATGTCACCATGTCTCCTCTTGAAACCAAGGATTTGAACCGGATTTTCGAGTCGCTTGACCAAAATTGTGATGGGCTATTGAGCCTTGATGAGCTTCATTGGCTCCTAGAGAGAACTAATGTTCATGTCAACCATGAAGAGCTTGTTTCCTTGGTGGGTGAAGATGGGCTAAACTTTGATGAGTTCTCCACTTTTTATGAATCAATATTATTGAAGAGCAAGAAAAATAGTGGAGATTTGAGTTCAAATAATGGTGATTTTGACCAATATGAAGAGGAAGATAGTGATTTGTATAAGGCATTTAAGGTGTTTGATTTGGATGGTGATGGGCTCATCTCATCCCAAGAGCTTCAAAGAGTGCTTTGGAGATTAGGGATGTGGGATTGCAAGAATGGGCTTGATGTTGATAGAATTATCCGTAAGTATGATGTTAATAGTGATGGGTTTGTAGATTTCCATGAGTTTAAGAGTATGATGCTTGCCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126018.p1 GENE.S_Transcript_126018~~S_Transcript_126018.p1 ORF type:complete len:192 (+),score=43.38,EF-hand_1|PF00036.28|0.0012,EF-hand_1|PF00036.28|1.9e+03,EF-hand_1|PF00036.28|4.4e+02,EF-hand_1|PF00036.28|3.2e-07,EF-hand_1|PF00036.28|6.6e-08,EF-hand_5|PF13202.2|0.023,EF-hand_5|PF13202.2|6.1e+03,EF-hand_5|PF13202.2|9.4e+02,EF-hand_5|PF13202.2|7.6e-08,EF-hand_5|PF13202.2|0.0002,EF-hand_6|PF13405.2|0.0061,EF-hand_6|PF13405.2|1.4e+04,EF-hand_6|PF13405.2|3.7e-06,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|0.012,EF-hand_7|PF13499.2|1e-06,EF-hand_7|PF13499.2|6.1e-08,EF-hand_8|PF13833.2|0.058,EF-hand_8|PF13833.2|0.019,EF-hand_8|PF13833.2|0.15 S_Transcript_126018:257-832(+)
MVLHHTKSKSQHIFMPSYHNHLLVNSPKIYVTMSPLETKDLNRIFESLDQNCDGLLSLDELHWLLERTNVHVNHEELVSLVGEDGLNFDEFSTFYESILLKSKKNSGDLSSNNGDFDQYEEEDSDLYKAFKVFDLDGDGLISSQELQRVLWRLGMWDCKNGLDVDRIIRKYDVNSDGFVDFHEFKSMMLAH*

Click here to download the sequence:
Link to NCBI Protein BLAST