Transcript Information: S_Transcript_12608.p1


Annotated TAIR IDAT5G38530.1
Annotated Gene Nametryptophan synthase beta type 2
Annotated Gene Symbol(s)TSBtype2
Annotation TypeOrtholog
Chromosome Positionchr5:15424097-15426294 | Forward length=506
E-Value5.5E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.437441939376
Replicate 211.842526747784
Replicate 35.1531174351237
Condition 2: 8 Hour
Replicate 17.5788764607458
Replicate 25.3187973481703
Replicate 36.1648774935976
Condition 3: 24 Hour
Replicate 17.0674623057805
Replicate 212.331779828307
Replicate 310.200091487363


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12608.p1 GENE.S_Transcript_12608~~S_Transcript_12608.p1 ORF type:complete len:408 (+),score=67.70,PALP|PF00291.21|8.2e-40 S_Transcript_12608:476-1699(+)
ATGGAGACCTACTCCTCTCATCAGGTTTTTTCTTTTACAAAACTAGAATTGCAATTGTTTCGCAGCAGTATCTGTCAAATGGAGTACTTTTTAAGAAATATCTTAACATTCTATAGAGCCAAGAGATTGGAGAAGCTCCTCGGAACTCCTGCAAGAATCTATTACAAATATGAAGGTGTTAGCCCTGCTGGATCCCACAAACCTAACACTTCAGTTCCACAAGCTTGGTACAATGCACAAGAAGGTGTTAAGAAAGTTGTGACTGAAACCGGGGCTGGCCAATGGGGGAGTGCTCTTGCCTTTGCTTGTAGCTTATTCAATCTAGAATGTCAGGTATGGCAAGTTCGTGCATCATATGACCAGAAACCTTACAGGAAGATGATGATGGAAACATGGGGTGCTAAGGTGCATCCGTCACCATCTGATATAACAGAGGCAGGGCGTAAAATCCTCCAAGAGGATCCAACGAGCCCTGGTAGTTTAGGGATAGCCATATCAGAAGCTGTAGAGGTTGCTGCGAAAAATCCTGATACAAAATACTGTCTAGGAAGTGTGCTTAACCATGTGTTATTACACCAGACTGTTATAGGTGAGGAATGCATAAAGCAAATGGAAGCCCTTGGTGAGACCCCAGATGTGATCATTGGGTGTACTGGTGGGGGCTCCAATTTTGGAGGGCTATGTTTTCCATTTATTAGGGAAAAACTTGAAGGGAAAATGAATCCTCTTATCAGAGCTGTTGAGCCTGCTGCTTGCCCTTCCTTGACAAAAGGCGTCTATGCTTATGATTATGGTGATACTGCTGGTTTGACACCGTTAATGAAGATGCATACGCTTGGTCATGATTTCATTCCCGACCCCATCCATGCTGGTGGTCTACGTTACCATGGTATGGCTCCGCTGATTTCACATGTGTATGAATTAGGACTGATGGAAGCAGTTTCGATTCCTCAAACTGAATGCTTCCAAGGGGCCATCCAATTCGCGAGGTCAGAAGGACTGATACCGGCACCAGAACCAACTCATGCAATCGCTGCAGTGATCAGGGAAGCTCTCCGCTGCAAGGAGTTGGGAGAATCAAAAGTGATCCTAATGGCTATGTGTGGACATGGCCACTTTGATCTGGCAGCCTACGACAAGTTTTTGCAAGGGAATTTAGTTGACCTTTCGTTTTCTGAGGAGAAGATACGGGAATCACTTGCCAAAGTCCCCCAAGTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12608.p1 GENE.S_Transcript_12608~~S_Transcript_12608.p1 ORF type:complete len:408 (+),score=67.70,PALP|PF00291.21|8.2e-40 S_Transcript_12608:476-1699(+)
METYSSHQVFSFTKLELQLFRSSICQMEYFLRNILTFYRAKRLEKLLGTPARIYYKYEGVSPAGSHKPNTSVPQAWYNAQEGVKKVVTETGAGQWGSALAFACSLFNLECQVWQVRASYDQKPYRKMMMETWGAKVHPSPSDITEAGRKILQEDPTSPGSLGIAISEAVEVAAKNPDTKYCLGSVLNHVLLHQTVIGEECIKQMEALGETPDVIIGCTGGGSNFGGLCFPFIREKLEGKMNPLIRAVEPAACPSLTKGVYAYDYGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGLMEAVSIPQTECFQGAIQFARSEGLIPAPEPTHAIAAVIREALRCKELGESKVILMAMCGHGHFDLAAYDKFLQGNLVDLSFSEEKIRESLAKVPQVS*

Click here to download the sequence:
Link to NCBI Protein BLAST