Transcript Information: S_Transcript_12609.p1


Annotated TAIR IDAT5G38530.1
Annotated Gene Nametryptophan synthase beta type 2
Annotated Gene Symbol(s)TSBtype2
Annotation TypeOrtholog
Chromosome Positionchr5:15424097-15426294 | Forward length=506
E-Value2.2E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.092285793094
Replicate 219.162104077842
Replicate 319.471414590256
Condition 2: 8 Hour
Replicate 17.5191117253636
Replicate 28.1109092677893
Replicate 310.912694889403
Condition 3: 24 Hour
Replicate 113.228774066017
Replicate 216.930138129742
Replicate 318.790925512975


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12609.p1 GENE.S_Transcript_12609~~S_Transcript_12609.p1 ORF type:complete len:502 (+),score=100.42,PALP|PF00291.21|1.2e-43 S_Transcript_12609:102-1607(+)
ATGGCAGCTCAATCTCTCCTTTCTTCTACTGCTTCTCACAGCTATTTTCAATTCAAAGGCAATGGCGATGGCCATGGCTCGTTATCTATGAAGAAGACAAAGCCATTGCAATATCTGAAGGTCCCCTCTGGATACAGAGCTAGATCACTAGCTGCTAACAATGCTAATGGCAAGGCCATTGAGATTCCCAAGCATTGGTACAATTTAGCTGCTGATCTTCCTGTTAAACCTCCTCCGCCTTTGAATCCTAGGACTTTCGAGCCTGTCAAACCTGAAGATTTGGCACCCCTTTTGCCATATGAATTGATCAAGCAAGAAGTAAGCACCGACAAATTCATTGAAATACCAGAGGATGTTCTTGATGTTTATGAACTATGGAGGCCTACTCCTCTCATCAGAGCCAAGAGATTGGAGAAGCTCCTCGGAACTCCTGCAAGAATCTATTACAAATATGAAGGTGTTAGCCCTGCTGGATCCCACAAACCTAACACTTCAGTTCCACAAGCTTGGTACAATGCACAAGAAGGTGTTAAGAAAGTTGTGACTGAAACCGGGGCTGGCCAATGGGGGAGTGCTCTTGCCTTTGCTTGTAGCTTATTCAATCTAGAATGTCAGGTATGGCAAGTTCGTGCATCATATGACCAGAAACCTTACAGGAAGATGATGATGGAAACATGGGGTGCTAAGGTGCATCCGTCACCATCTGATATAACAGAGGCAGGGCGTAAAATCCTCCAAGAGGATCCAACGAGCCCTGGTAGTTTAGGGATAGCCATATCAGAAGCTGTAGAGGTTGCTGCGAAAAATCCTGATACAAAATACTGTCTAGGAAGTGTGCTTAACCATGTGTTATTACACCAGACTGTTATAGGTGAGGAATGCATAAAGCAAATGGAAGCCCTTGGTGAGACCCCAGATGTGATCATTGGGTGTACTGGTGGGGGCTCCAATTTTGGAGGGCTATGTTTTCCATTTATTAGGGAAAAACTTGAAGGGAAAATGAATCCTCTTATCAGAGCTGTTGAGCCTGCTGCTTGCCCTTCCTTGACAAAAGGCGTCTATGCTTATGATTATGGTGATACTGCTGGTTTGACACCGTTAATGAAGATGCATACGCTTGGTCATGATTTCATTCCCGACCCCATCCATGCTGGTGGTCTACGTTACCATGGTATGGCTCCGCTGATTTCACATGTGTATGAATTAGGACTGATGGAAGCAGTTTCGATTCCTCAAACTGAATGCTTCCAAGGGGCCATCCAATTCGCGAGGTCAGAAGGACTGATACCGGCACCAGAACCAACTCATGCAATCGCTGCAGTGATCAGGGAAGCTCTCCGCTGCAAGGAGTTGGGAGAATCAAAAGTGATCCTAATGGCTATGTGTGGACATGGCCACTTTGATCTGGCAGCCTACGACAAGTTTTTGCAAGGGAATTTAGTTGACCTTTCGTTTTCTGAGGAGAAGATACGGGAATCACTTGCCAAAGTCCCCCAAGTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12609.p1 GENE.S_Transcript_12609~~S_Transcript_12609.p1 ORF type:complete len:502 (+),score=100.42,PALP|PF00291.21|1.2e-43 S_Transcript_12609:102-1607(+)
MAAQSLLSSTASHSYFQFKGNGDGHGSLSMKKTKPLQYLKVPSGYRARSLAANNANGKAIEIPKHWYNLAADLPVKPPPPLNPRTFEPVKPEDLAPLLPYELIKQEVSTDKFIEIPEDVLDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPAGSHKPNTSVPQAWYNAQEGVKKVVTETGAGQWGSALAFACSLFNLECQVWQVRASYDQKPYRKMMMETWGAKVHPSPSDITEAGRKILQEDPTSPGSLGIAISEAVEVAAKNPDTKYCLGSVLNHVLLHQTVIGEECIKQMEALGETPDVIIGCTGGGSNFGGLCFPFIREKLEGKMNPLIRAVEPAACPSLTKGVYAYDYGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGLMEAVSIPQTECFQGAIQFARSEGLIPAPEPTHAIAAVIREALRCKELGESKVILMAMCGHGHFDLAAYDKFLQGNLVDLSFSEEKIRESLAKVPQVS*

Click here to download the sequence:
Link to NCBI Protein BLAST