Transcript Information: S_Transcript_126099.p1


Annotated TAIR IDAT5G61000.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70D, ATRPA70D
Annotation TypeOrtholog
Chromosome Positionchr5:24549682-24552641 | Reverse length=629
E-Value1.9e-321
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4335516573485
Replicate 26.7443974582322
Replicate 35.397873975688
Condition 2: 8 Hour
Replicate 18.738208715313
Replicate 210.221934093924
Replicate 314.695803877255
Condition 3: 24 Hour
Replicate 11.3142450230114
Replicate 24.9012795766735
Replicate 34.7163172464851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126099.p1 GENE.S_Transcript_126099~~S_Transcript_126099.p1 ORF type:complete len:615 (+),score=134.07,Rep_fac-A_C|PF08646.6|16,Rep_fac-A_C|PF08646.6|1.7e-41,REPA_OB_2|PF16900.1|4.5,REPA_OB_2|PF16900.1|1.2e-23,Rep-A_N|PF04057.8|4.8e-20,Rep-A_N|PF04057.8|1.3e+04,tRNA_anti-codon|PF01336.21|3.1e-11,tRNA_anti-codon|PF01336.21|9.3,DUF223|PF02721.10|1.1e-05 S_Transcript_126099:238-2082(+)
ATGGAGGTGAAAACAGTAACCCAAGATGCAATTTCGAAGATAATAGCAAACCCATCTCCAGATTCATCTTCTGATGTTCCTGATCTCGTTGTGCAAGTCCTCGATCTCCGAGCTGTTGGCTCTAGATTCATGTTTACAGCCAGTGATGGGAAACAAAAGCTAAAAGGAATCCTACAATCAAGTTTCTCAGATATGGTATCATCAGGGGACATTCAGAGTCTGGGTTTGATTCGGATTCTTGATTATACCCTCAATGACATCCCAAACAAGCCTGACAAATATCTGATTGTAACAAAGTGTGAGTCTGTATCTCCTGCCCTTGAGTCGGAGATTAAGGCGGAGGTGAAGACTGAGGATTTGAGGGCTGAGGTTAAGGCAGAAGATGCTGGTATTGTGTTGAAGCCTAAGCAAGAAGTTGTTGCTAAATCAGCTGCTCAGATAGTAAATGAGCAAAGGGGCAATATGGCGCCTGCTGCGAGAATGGCTATGACTAGAAGAGTTCACCCTTTGGCTTCTTTGAACCCTTACCAGGGTAACTGGACAATAAAGGTCCGAGTTACCAGCAAAGGGCAATTGCGAAGCTACAAAAATGCAAGAGGAGAAGGCAATGTTTTTAATGTTGAATTGACTGATGAAGATGGTACTCAAATACAAGCGACAATGTTTAATGAAGCTGCGAGGAAGTTCTTTGAGAAGTTTCAAGTGGGGAAGGTTTTTTACATATCAAAAGGGACTCTGAAACTTGCTAATAAGCAGTACAAGACTGTCCAAAATGACTATGAAATGACCCTTAATGAGAACTCTATGGTTGAGGAAGCCGGTGATGAAGCAACATTCATTCCTGAAACAAAGTTCAACTTTGTACCCATTGATCAGCTAGGTCCCTATGTAAATGGAAGGGATGTCGTAGATGTAATTGGTGTGGTTCAAAGTGTGTCCCCGACAATGAGTATTAGGAGGAAGAGCAACAATGAGATGATCCCAAAGCGTGATATCACAATTGCTGATGAATCGAAGAAAACAGTTGTAGTCTCTTTGTGGAATGATCTTGCCACAAATGTGGGGCAAGAATTGCTCGACATGGCTGATCAGTCTCCAGTTGTTGCCATCAAGACTGTTAAAGTTGGGGACTTCCAGGGTGTGTCATTATCTGCACTCAGCAAAAGTGTAGTTCAGATCAATCCTGATCTACCCGAATCAAAGAAGTTGAAATCTTGGTATGATTCTGAAGGCAAACAGACGTCCATGGCTTCTGTAGGTGCTGGTTTGAGCCCCTCTACTAATAGTGGAGCCAGGTCCATGTACACTGACAGAGTCCCCATCTCTCACATTACAAGTAATCCATCTTTGGGAGAAGACAAGCCTGTATTTTTCAGCATCAAAGCATATATAAGCCTCATTAAGTCTGATCAGACTATGTGGTATCGGGCTTGTAAGACCTGCAACAAGAAGGTTACCGAAGCCATTGGATCTGGATACTGGTGTGAGGGGTGCCAAAAGAATGACGAAGAATGCAGCTTAAGGTACGTTATGGTGGCAAGAATTTCTGATGCTAGTAGTGAGGCTTGGGTTTCTACCTTCAATGACCAAGCTGAAAGAGTTATCGGGTGCTCTGCAGATGAGCTTGACAAGATGAAATCACAGGAGGGTGACGAAAATCTTTACCAAACGAAACTGAAGGAAGCGACTTGGGTACCTTACAATTTCCGCGTAAGTGTGATGCAAAACGAGTACATGAACGAGAAGAGACAAAGGATTACAGTCAAAGCTGTTGCCCCGCTTGATTTTGCAGCTGAAACTAAGTATCTTCTAGAAGAGATATCTAAAATGAAAGCCTCTCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126099.p1 GENE.S_Transcript_126099~~S_Transcript_126099.p1 ORF type:complete len:615 (+),score=134.07,Rep_fac-A_C|PF08646.6|16,Rep_fac-A_C|PF08646.6|1.7e-41,REPA_OB_2|PF16900.1|4.5,REPA_OB_2|PF16900.1|1.2e-23,Rep-A_N|PF04057.8|4.8e-20,Rep-A_N|PF04057.8|1.3e+04,tRNA_anti-codon|PF01336.21|3.1e-11,tRNA_anti-codon|PF01336.21|9.3,DUF223|PF02721.10|1.1e-05 S_Transcript_126099:238-2082(+)
MEVKTVTQDAISKIIANPSPDSSSDVPDLVVQVLDLRAVGSRFMFTASDGKQKLKGILQSSFSDMVSSGDIQSLGLIRILDYTLNDIPNKPDKYLIVTKCESVSPALESEIKAEVKTEDLRAEVKAEDAGIVLKPKQEVVAKSAAQIVNEQRGNMAPAARMAMTRRVHPLASLNPYQGNWTIKVRVTSKGQLRSYKNARGEGNVFNVELTDEDGTQIQATMFNEAARKFFEKFQVGKVFYISKGTLKLANKQYKTVQNDYEMTLNENSMVEEAGDEATFIPETKFNFVPIDQLGPYVNGRDVVDVIGVVQSVSPTMSIRRKSNNEMIPKRDITIADESKKTVVVSLWNDLATNVGQELLDMADQSPVVAIKTVKVGDFQGVSLSALSKSVVQINPDLPESKKLKSWYDSEGKQTSMASVGAGLSPSTNSGARSMYTDRVPISHITSNPSLGEDKPVFFSIKAYISLIKSDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYVMVARISDASSEAWVSTFNDQAERVIGCSADELDKMKSQEGDENLYQTKLKEATWVPYNFRVSVMQNEYMNEKRQRITVKAVAPLDFAAETKYLLEEISKMKASQ*

Click here to download the sequence:
Link to NCBI Protein BLAST