Transcript Information: S_Transcript_126145.p1


Annotated TAIR IDAT3G58780.3
Annotated Gene NameK-box region and MADS-box transcription factor family protein
Annotated Gene Symbol(s)SHP1
Annotation TypeOrtholog
Chromosome Positionchr3:21739150-21741766 | Forward length=273
E-Value1.6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5983107714821
Replicate 24.308118670994
Replicate 33.4921157081374
Condition 2: 8 Hour
Replicate 14.0379437286879
Replicate 24.6994119923686
Replicate 33.3424258078817
Condition 3: 24 Hour
Replicate 12.843712643746
Replicate 23.2185294546292
Replicate 33.6564502244103


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126145.p1 GENE.S_Transcript_126145~~S_Transcript_126145.p1 ORF type:complete len:338 (+),score=51.05,SRF-TF|PF00319.14|7e-23,K-box|PF01486.13|1.1e-13 S_Transcript_126145:163-1176(+)
ATGATTACTTATCCTCAACTGACCTCGACTAAAACGAATCATGTAATGTCAAATCAAGGTCAAAAAAGTACCCCATCAGTGAGCTATCACTCTCTTAAAACAGTACTTTCACAGATTTGGAAAACCTTCATAACCACACTCTTTTCTCCCACTTTTGCCTTCTTTGTCCATTTTAGGCAAAAAACCCCCTCATCTCCCACTCTCTTTAATAAATTCACACTAAGAAAAGGATGCCAGCCATTATTCCTAAGACCACAAACACAAACAACCCTTATAGTTGTTGTACTCCAAAGATCAAAGATCACTTCTTTTTTGTTTTCAAAGATGGGAAGAGGGAAGATTGAGATAAAGAAGATAGAAAACAGGACAAACAGGCAAGTAACCTTCTCAAAGAGAAGAAATGGGATCATGAAGAAAGCCCATGAACTTACTGTCCTCTGTGATGCCACCGTTTCTCTTATTATGGTCTCCAGTACCGAGAGATTGCATGAGTATATCAGCCCTGGTGCCTCGCTTAAGAAGATTTATGATGAGTACCAGAGGATCGCGGATGTTGATATCTGGAGTGCTCACTATGAGAAAATGAAAGAGCATGAAAGGAAATTACTTGAGCAAAATAATATGCTCCGAAGGGAAATTAGCCAAAGGATGGGTGGAGATCTGGAGGATCTGTCCATAGGGGAGCTGAATTGTCTTTCTCAAGAGATGGATAAAGCCTTGGAAACCATCCGTAGTCAAAAGTATCATAAGATCAAAACTCAAAGTGTGACAAGCAGAAAGAAGGTTAAGAACCTGGAGGAACAGCATGGAACTCTTCTCATGGATCTTGAGGCAAAATTCGGAGCCCCGCAATTTGGTTTAACAGATGACGACCAGGGGGACTATGATGCTGCGAGTGTGTATGCAAATGATGGAGCAGCAGCCAGTTTGTATGCCCTGAGCCGTCACCCTCGCCACTCTAATCTTCAGCACGGAGGAAGCTATGCAAGTGTCCATGATTTGCGTCTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126145.p1 GENE.S_Transcript_126145~~S_Transcript_126145.p1 ORF type:complete len:338 (+),score=51.05,SRF-TF|PF00319.14|7e-23,K-box|PF01486.13|1.1e-13 S_Transcript_126145:163-1176(+)
MITYPQLTSTKTNHVMSNQGQKSTPSVSYHSLKTVLSQIWKTFITTLFSPTFAFFVHFRQKTPSSPTLFNKFTLRKGCQPLFLRPQTQTTLIVVVLQRSKITSFLFSKMGRGKIEIKKIENRTNRQVTFSKRRNGIMKKAHELTVLCDATVSLIMVSSTERLHEYISPGASLKKIYDEYQRIADVDIWSAHYEKMKEHERKLLEQNNMLRREISQRMGGDLEDLSIGELNCLSQEMDKALETIRSQKYHKIKTQSVTSRKKVKNLEEQHGTLLMDLEAKFGAPQFGLTDDDQGDYDAASVYANDGAAASLYALSRHPRHSNLQHGGSYASVHDLRLA*

Click here to download the sequence:
Link to NCBI Protein BLAST