Transcript Information: S_Transcript_126249.p1


Annotated TAIR IDAT5G21140.1
Annotated Gene Nameembryo defective 1379
Annotated Gene Symbol(s)emb1379
Annotation TypeHomolog
Chromosome Positionchr5:7187416-7189521 | Reverse length=312
E-Value3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6168143310431
Replicate 23.880390123181
Replicate 34.4484991558433
Condition 2: 8 Hour
Replicate 15.143812739811
Replicate 23.9347472481931
Replicate 34.82016654384
Condition 3: 24 Hour
Replicate 13.622518367787
Replicate 23.302766511126
Replicate 33.1685985433563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126249.p1 GENE.S_Transcript_126249~~S_Transcript_126249.p1 ORF type:complete len:199 (+),score=43.22,SMC_Nse1|PF07574.9|1.9e-10,SMC_Nse1|PF07574.9|5.5e+02,zf-RING-like|PF08746.7|5.5e-08 S_Transcript_126249:1069-1665(+)
ATGCCTTTTCTAGAGACTGATATTTGTTATGCTAACAAACAGGCTCTTAGTAGTTCACAAGGACAGCCGGGACCACAATCACAATCAGAAGATGTGCCTGCTGCACTAAAGTATTTCTCAATGTCTCAGAAGGAAAAGACCCTCGAGGAGCTTGTCCGTGATGGATGGCTCTATTCAAGCGAAGATGCTAACATTGGACTTGGTATTAGATCATTTCTTGATCTTCGGAGTTGGTTCCGCCATAATGATATTCCTGCATGTGAGGTTTGCAACGAGGCTGGGGTGAAGGCAGAGCTGTGCCCCTATGAAGGTTGTGCAGTCCGAATTCACAAGTACTGTCTAATTAAGAAATATTCCCAACCAAAGGCTGAAAAAATATGTCCTGTTTGTCGCAAACCATGGCCATATGTTGTTACTAAAGCTGAAGCTGTGGAGCTAGAGGATGATACATCTACACCAACAGAGAGACAACCTTCTAATGAGCCATCCCAGAGAAAAAGGAGAAGGAACTCCCAGCACCTGTCCCAAGATTCTGATAATGCGAGATCAGGGTCCACTCAGGAAAGTGGATTGAGGAGATCTGCTCGTCTTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126249.p1 GENE.S_Transcript_126249~~S_Transcript_126249.p1 ORF type:complete len:199 (+),score=43.22,SMC_Nse1|PF07574.9|1.9e-10,SMC_Nse1|PF07574.9|5.5e+02,zf-RING-like|PF08746.7|5.5e-08 S_Transcript_126249:1069-1665(+)
MPFLETDICYANKQALSSSQGQPGPQSQSEDVPAALKYFSMSQKEKTLEELVRDGWLYSSEDANIGLGIRSFLDLRSWFRHNDIPACEVCNEAGVKAELCPYEGCAVRIHKYCLIKKYSQPKAEKICPVCRKPWPYVVTKAEAVELEDDTSTPTERQPSNEPSQRKRRRNSQHLSQDSDNARSGSTQESGLRRSARLR*

Click here to download the sequence:
Link to NCBI Protein BLAST