Transcript Information: S_Transcript_126252.p1


Annotated TAIR IDAT5G21140.1
Annotated Gene Nameembryo defective 1379
Annotated Gene Symbol(s)emb1379
Annotation TypeOrtholog
Chromosome Positionchr5:7187416-7189521 | Reverse length=312
E-Value7.4E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5371710502455
Replicate 23.0720339890211
Replicate 32.2177973771418
Condition 2: 8 Hour
Replicate 13.1043289702156
Replicate 23.0442705427476
Replicate 33.7774919806296
Condition 3: 24 Hour
Replicate 12.4886576128525
Replicate 22.3667904494287
Replicate 31.9155983092493


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126252.p1 GENE.S_Transcript_126252~~S_Transcript_126252.p1 ORF type:complete len:316 (+),score=55.72,SMC_Nse1|PF07574.9|1.1e-43,SMC_Nse1|PF07574.9|3.7e+03,zf-RING-like|PF08746.7|9.7e-08 S_Transcript_126252:231-1178(+)
ATGCCAGAATTAAACTGGAAGCATCACACTCTAATTCAGTCACTGCTCTCTCGCGGCCCTCTCAAAGCCGAAGAATTTCACAAAGTTTTCGAAGGCGTCACTGGAAGAAACCCAGGTGCTTATGAGCAGTTATTTAACGATTATCTGTTGAAAATAAACAAAGAGCTCTCACTTCTTCAATTAGAGTTAAGGGCGTGTAGAAACCAGTATGATGGTAAAGTCTATTATGGTCTCATTAATAATGTTGCTGATGATCATTCCAAGCTTGGCACCAAATATTCTATTGCTCAGATTGCCTTCTACAAAGGAATTATAGAAGCAATTGTACAAGATGCTGCAGGTCAGGGTTGCATCAGCAGTTTTACTGCCCTCCATATAAAGTTGGATAATCAGGCTCTTAGTAGTTCACAAGGACAGCCGGGACCACAATCACAATCAGAAGATGTGCCTGCTGCACTAAAGTATTTCTCAATGTCTCAGAAGGAAAAGACCCTCGAGGAGCTTGTCCGTGATGGATGGCTCTATTCTAGCGGAGATGCTAATATTGGACTTGGTATTAGATCATTCCTTGATCTTCGGAGTTGGTTCCGCCATAATGATATTCCTGCATGTGAGGTTTGCAACGAGGCTGGGGTGAAGGCAGAGCTGTGCCCCTATGAAGGTTGTGCAGTCCGAATTCACAAGTACTGTCTCATTAAGAAATATTCCCAACCGAAGGCTGAAAAAATATGTCCTGGCTGTCGCAAACCATGGCCATATGTTGTTACCAAAGCTGAAGCCGTGGAGCTTGAGGATGATATGTCTACGCCAACAGAGAGACAACCTTCTAATGAGCCATCCCAGAGAAAAAGGAGAAGGAACTCCCAGATCCTGTCCCAAGATTCTGATAATGTGAGATCAGGGTCCACTCAGGAAAGTGGATTGAGGAGATCTGCTCGTCTTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126252.p1 GENE.S_Transcript_126252~~S_Transcript_126252.p1 ORF type:complete len:316 (+),score=55.72,SMC_Nse1|PF07574.9|1.1e-43,SMC_Nse1|PF07574.9|3.7e+03,zf-RING-like|PF08746.7|9.7e-08 S_Transcript_126252:231-1178(+)
MPELNWKHHTLIQSLLSRGPLKAEEFHKVFEGVTGRNPGAYEQLFNDYLLKINKELSLLQLELRACRNQYDGKVYYGLINNVADDHSKLGTKYSIAQIAFYKGIIEAIVQDAAGQGCISSFTALHIKLDNQALSSSQGQPGPQSQSEDVPAALKYFSMSQKEKTLEELVRDGWLYSSGDANIGLGIRSFLDLRSWFRHNDIPACEVCNEAGVKAELCPYEGCAVRIHKYCLIKKYSQPKAEKICPGCRKPWPYVVTKAEAVELEDDMSTPTERQPSNEPSQRKRRRNSQILSQDSDNVRSGSTQESGLRRSARLR*

Click here to download the sequence:
Link to NCBI Protein BLAST