Transcript Information: S_Transcript_126501.p1


Annotated TAIR IDAT1G15950.1
Annotated Gene Namecinnamoyl coa reductase 1
Annotated Gene Symbol(s)CCR1, IRX4, ATCCR1
Annotation TypeOrtholog
Chromosome Positionchr1:5478855-5481915 | Forward length=344
E-Value1.3E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1136.24615209614
Replicate 2116.16734093549
Replicate 3137.11072015505
Condition 2: 8 Hour
Replicate 1249.9982345924
Replicate 2266.63591031837
Replicate 3241.86961772183
Condition 3: 24 Hour
Replicate 1170.93780550657
Replicate 2161.22361587839
Replicate 3168.9068104914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126501.p1 GENE.S_Transcript_126501~~S_Transcript_126501.p1 ORF type:complete len:343 (+),score=53.53,Epimerase|PF01370.17|3.3e-24,3Beta_HSD|PF01073.15|1.2e-18,NAD_binding_10|PF13460.2|1.7e-12,GDP_Man_Dehyd|PF16363.1|9.7e-12,NmrA|PF05368.9|3.7e-09,NmrA|PF05368.9|5.4e+02,NAD_binding_4|PF07993.8|3.9e-07,Polysacc_synt_2|PF02719.11|7e-06 S_Transcript_126501:385-1413(+)
ATGCCTTCTGACAACGTCGCCGTCGCTGACGCCGCCGGAAACGGACAAACGGTTTGTGTGACCGGAGCCGGTGGCTTCATTGCCTCTTGGATGGTGAAGCTCCTTCTTGAGAAGGGCTATACCGTTAAGGGGACCGTTAGAAATCCAGATGATCCCAAAAATGCACATTTGAGGGAGCTAGAAGGGGCAAAGGAAAGGCTGATGTTATGCAAGGCTGATCTTCTGGATTTTGAGGGTTTAAAAATTGCTATTAATGGCTGTAATGGTGTTTTTCACACTGCTTCTCCTGTCACTGATGATCCAGAACAAATGGTGGAGCCAGCAGTGATTGGAGCGAAGAATGTAATAATAGCAGCGGCAGAGGCAAATGTGAAACGCGTGGTGTTCACGTCCTCCGTCGGAGCTGTTCACATGGACCCTAATCGGAGCCCCGACAAGGTCGTGGATGAGAGTTGTTGGAGCGACCTCGACTTTTGCAAAAACACCAAGAATTGGTATTGCTACGGAAAGACGGTGGCGGAACAGGCGGCGGTGGAGGTGGCGAAAGAGAAAGGAGTGGACCTAGTGGTGGTGTGTCCAGTGCTAGTGTTGGGGCCAATCTTACAATCAAGTGTGAATGCAAGCATCATTCATATACTAAAGTACTTGACTGGGTCAGCCAAGACATATGCAAATTCGACTCAAGCCTATGTGGATGTGAGGGATGTAGCAAAAGCCCACATTTTGGTTTATGAGACTCCTTCTGCCACCGGTAGATACCTTTGTGCTGAGAGTGTACTTCATCGTGGTGAAGTTTGTGAGATTCTCGCCAAGTTTTTCCCTGAGTACCCTGTCCCTACCAAATGCTCAGACAAGGTGAACTCAAGAGTTAAGCCATACAAGTTCACAAACCAAAAGCTCAAGGACTTGGGAATGGAATTCACACCAACCAAACAGTGCTTATACGAGACTGTCAAGTGCCTCCAAGAAAAGGGTCACCTTCCTGTTCCTGTACAACAAGAAGACGCAATAATACGGATTCAGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126501.p1 GENE.S_Transcript_126501~~S_Transcript_126501.p1 ORF type:complete len:343 (+),score=53.53,Epimerase|PF01370.17|3.3e-24,3Beta_HSD|PF01073.15|1.2e-18,NAD_binding_10|PF13460.2|1.7e-12,GDP_Man_Dehyd|PF16363.1|9.7e-12,NmrA|PF05368.9|3.7e-09,NmrA|PF05368.9|5.4e+02,NAD_binding_4|PF07993.8|3.9e-07,Polysacc_synt_2|PF02719.11|7e-06 S_Transcript_126501:385-1413(+)
MPSDNVAVADAAGNGQTVCVTGAGGFIASWMVKLLLEKGYTVKGTVRNPDDPKNAHLRELEGAKERLMLCKADLLDFEGLKIAINGCNGVFHTASPVTDDPEQMVEPAVIGAKNVIIAAAEANVKRVVFTSSVGAVHMDPNRSPDKVVDESCWSDLDFCKNTKNWYCYGKTVAEQAAVEVAKEKGVDLVVVCPVLVLGPILQSSVNASIIHILKYLTGSAKTYANSTQAYVDVRDVAKAHILVYETPSATGRYLCAESVLHRGEVCEILAKFFPEYPVPTKCSDKVNSRVKPYKFTNQKLKDLGMEFTPTKQCLYETVKCLQEKGHLPVPVQQEDAIIRIQS*

Click here to download the sequence:
Link to NCBI Protein BLAST