Transcript Information: S_Transcript_126555.p1


Annotated TAIR IDAT1G74580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28020777-28023068 | Forward length=763
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.788225379439
Replicate 21.4824799307421
Replicate 31.8953009413977
Condition 2: 8 Hour
Replicate 14.7483411905079
Replicate 26.2193149709912
Replicate 35.3078988107266
Condition 3: 24 Hour
Replicate 11.8707739484699
Replicate 21.5527249037814
Replicate 32.2929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126555.p1 GENE.S_Transcript_126555~~S_Transcript_126555.p1 ORF type:complete len:759 (+),score=128.07,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|31,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|7e-15,PPR_2|PF13041.2|7.7e-10,PPR_2|PF13041.2|7.3e-08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.5e-15,PPR_2|PF13041.2|2.8e-17,PPR_2|PF13041.2|3.2e-16,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|6.5e-17,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|2.8e-15,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|0.087,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|2.3e-06,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|13,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.022,PPR|PF01535.16|0.039,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.0089,PPR|PF01535.16|0.62,PPR|PF01535.16|0.02,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.38,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.1e+02,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|4.9e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|14,PPR_3|PF13812.2|2.5e+02,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|0.0013,MRP-S27|PF10037.5|0.016,MRP-S27|PF10037.5|1.2e+02,MRP-S27|PF10037.5|0.13,MRP-S27|PF10037.5|0.094,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|3.5e+02,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|1.8e+03,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|5.4e+02,ATP13|PF12921.3|18,ATP13|PF12921.3|4.5e+02,ATP13|PF12921.3|17,ATP13|PF12921.3|6.4e+03 S_Transcript_126555:1004-3280(+)
ATGAATAGGCCTTTACTAGCTAAACATGTAGCTGCTGTGATAAAACATCAGAAAGACCCTCTAAAGGCGCTCGAAACGTTCAAATCCGTTAAGAATGAAGAGGGTTTTAGGCACAATTTGCTGACCTATAGGTGCATAGTAGATAAGCTTGGTTATCATGGGAAATTTGAAGCGATGGAGTCTTTGCTTTCCGAGATGAGGAAGGATATCGACAATGGTGTGGTGGAGGGAGTGTACATTGGAGCCATGAAAAATTACGGGAGGAAAGGGAAGGTTCAAGAGGCGGTGGATGTATTTGAGAGGATGGATTTCTATAACTGTGAACCGTCTGTCATGTCTTATAACGCCATCATGAACATTCTTGTCGAACATGGGTATTTTGATCAAGTGCACAAAGTTTATATGAGGTTGCAAGATAAAGGGATTAGTCCTGATGTATATACTTATACAATCAGGATCAAGTTGTTTTGTAAGACTGGGAGATTTAATGCTGCTCTGAGGCTTCTTAAGAACATGGCTTCACAAGGGTGTGATGTCAATGCAGTTGCCTATTGTACTCTCATAGGGGGGCTTTATGAAGAGAATTATGGTGTTGAAGCATCCAAGTTATTTTGTCAGATGCTCAGCCTTGGCATTTGTCCTGAGACGTCTACATTTAACAAGCTAGTACATGTGCTTTGCAGGCAAAGGGATGTCCGAGAAAGTCAAAGACTTTTGGGCAAGGTGTTCAAAAGGGGATTTTCACCAAATTTGTTTACATTCAATATTTTCATTGAAGGACTTTGTGAGAATAATTCAGTAGATGCTGCTGCTAATTTGCTCAATAACATTAGACGGGAGGGCTTTTCTCCAGATGTTGTGACATACAACATACTCATACGTGGATTGTGTAAGAACTCCAATATTCTTGAAGCTGAGCATTACATGCATCAAATGATAAATAGTGGGTTTAGTCCGGATGCTTTCACATACAATTCTATCATTGATGCATACTGCAAATCAGGTATGGTACAAAAGGCAGATAATGTGCTTCGTGATGCAGTTTTTAGAGGCTTTGTGCCTGATGAATTCACATATTGCTCCTTGATCAATGGCTTATGCAAGGAGGGTGATGTAGAGAGAGCCATGGCAATATTTAATGAGGCTGAGACTAAAGGATGGAAGTCTAATATTATCCTCTATAATACGTTGATCAAAGGGTTATCTCAGCAGGGGCTGATTCTGGAGGCTGTACAACTTATTAACGATATGCTGAGAACTGGTTGCTTGCCTGACATATGGACTTACAATACAGTTATCAATGGATTGTGTAAAATGGGCTGCCTATCTGATGCCAATAACCTGGTAGATGATGCTATAACAAGAGGATGTTTGCCTGATGTTTTCACCTTTGATACACTAATTGATGGATACTGCAAGCAGATGAAGTTGGAAACTGCAATTGAAATTATTGATAAAATGTGGGAGCATGGTGTTACCCCTGACGTGATTACATACAACACTCTGTTGGATGGCCTTAGCAAGGCCGCTAAGTTTGAAGCTGCGATGGGGACTTTTGCAACAATGGTTGAGAAAGGGTGTGAGCCAAACCTTATTACCTACAATGTACTCATAGACAGTCTCTGCAAAGCTAATAAGATAAAAGATGCTTTAGACTTGCTGGAGGAGATGAGGTACAAGGGTCTTATTCCAGATCTTGTTACGTTTGGCACATTGATCAGTGGTTATTGCAGGATTGGAGATTTGAATGGAGCCTACCAGCTGTTCAGGAAGATTGACCAACAATATGGACATTCACATACAACAGCAACATATAACATTATGATCAATGCATTTTCGGAAAAGCTAAGATTAGATGTGGCTCAGAAGCTTTTTCATGAAATGGCTGAGAATGGCTCCCCTCCTGACAGCTATACTTACCGTGTCTTAATAGATGGATTTTGTAAAGCAGGGAATGGTGATGCTGGCTACAAGTGTCTCTTGGAGAAGATTGAGAAGGGCTTTATGCCCTCATTGACAACATGTGGAAGAGTACTCAATTGTCTTTGTGTGAAACACAGGGTCAGGGAAGCTGTTGGCATAATCCAACTTATGGCGCGTAAAGGTATCGTTCCAGAAGTCGTTGAGAATATTTTCAGCTCTACTAAAAGGGAGATTGCAGCACCAAAGATCATTGTGGAAGACTTGTTGAAGAAGAGCTACATAACTTATTATGCATATGAGCTTCTATATGATGGTGTTCGAGATATAAAGTCACCGAAGGAAGGTCTTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126555.p1 GENE.S_Transcript_126555~~S_Transcript_126555.p1 ORF type:complete len:759 (+),score=128.07,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|31,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|7e-15,PPR_2|PF13041.2|7.7e-10,PPR_2|PF13041.2|7.3e-08,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.5e-15,PPR_2|PF13041.2|2.8e-17,PPR_2|PF13041.2|3.2e-16,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|6.5e-17,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|2.8e-15,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|0.087,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|12,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|5.1e-08,PPR_1|PF12854.3|9.3e-11,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|6.7e-12,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|2.3e-06,PPR_1|PF12854.3|8.2e-15,PPR_1|PF12854.3|1.4e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|5.5e-06,PPR_1|PF12854.3|13,PPR|PF01535.16|7.7e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.022,PPR|PF01535.16|0.039,PPR|PF01535.16|0.00034,PPR|PF01535.16|0.0089,PPR|PF01535.16|0.62,PPR|PF01535.16|0.02,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.38,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.1e+02,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.1,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|4.9e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|14,PPR_3|PF13812.2|2.5e+02,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|0.0013,MRP-S27|PF10037.5|0.016,MRP-S27|PF10037.5|1.2e+02,MRP-S27|PF10037.5|0.13,MRP-S27|PF10037.5|0.094,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|3.5e+02,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|1.3e+03,ATP13|PF12921.3|1.8e+03,ATP13|PF12921.3|3.1e+02,ATP13|PF12921.3|5.4e+02,ATP13|PF12921.3|18,ATP13|PF12921.3|4.5e+02,ATP13|PF12921.3|17,ATP13|PF12921.3|6.4e+03 S_Transcript_126555:1004-3280(+)
MNRPLLAKHVAAVIKHQKDPLKALETFKSVKNEEGFRHNLLTYRCIVDKLGYHGKFEAMESLLSEMRKDIDNGVVEGVYIGAMKNYGRKGKVQEAVDVFERMDFYNCEPSVMSYNAIMNILVEHGYFDQVHKVYMRLQDKGISPDVYTYTIRIKLFCKTGRFNAALRLLKNMASQGCDVNAVAYCTLIGGLYEENYGVEASKLFCQMLSLGICPETSTFNKLVHVLCRQRDVRESQRLLGKVFKRGFSPNLFTFNIFIEGLCENNSVDAAANLLNNIRREGFSPDVVTYNILIRGLCKNSNILEAEHYMHQMINSGFSPDAFTYNSIIDAYCKSGMVQKADNVLRDAVFRGFVPDEFTYCSLINGLCKEGDVERAMAIFNEAETKGWKSNIILYNTLIKGLSQQGLILEAVQLINDMLRTGCLPDIWTYNTVINGLCKMGCLSDANNLVDDAITRGCLPDVFTFDTLIDGYCKQMKLETAIEIIDKMWEHGVTPDVITYNTLLDGLSKAAKFEAAMGTFATMVEKGCEPNLITYNVLIDSLCKANKIKDALDLLEEMRYKGLIPDLVTFGTLISGYCRIGDLNGAYQLFRKIDQQYGHSHTTATYNIMINAFSEKLRLDVAQKLFHEMAENGSPPDSYTYRVLIDGFCKAGNGDAGYKCLLEKIEKGFMPSLTTCGRVLNCLCVKHRVREAVGIIQLMARKGIVPEVVENIFSSTKREIAAPKIIVEDLLKKSYITYYAYELLYDGVRDIKSPKEGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST