Transcript Information: S_Transcript_126562.p1


Annotated TAIR IDAT1G80170.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30153646-30155683 | Reverse length=444
E-Value1.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5893813510371
Replicate 26.0701854867237
Replicate 35.5620950093399
Condition 2: 8 Hour
Replicate 110.380613276065
Replicate 213.02065264746
Replicate 311.391008508482
Condition 3: 24 Hour
Replicate 16.356976677157
Replicate 25.396145613416
Replicate 35.7383487270899


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126562.p1 GENE.S_Transcript_126562~~S_Transcript_126562.p1 ORF type:complete len:189 (+),score=29.39,Glyco_hydro_28|PF00295.13|7.1e-47 S_Transcript_126562:1390-1956(+)
ATGGTGAGCAATTCTTCAAAAATTCTAATTTCTGATGTTATTTGTGGTCCTGGCCATGGCATAAGTATTGGGAGCCTAGGGAAATCACATGAATGGTCCGAAGTGCACGATGTGACTGTTGATCATGTGTACTTATCTGGTACTCAGAATGGTGTGCGAATCAAAACCTGGCAGGGTGGTGCAGGTTTTGTAAGAAGGATTATGTTCCGCGATGTGTGGATGGAGAATGTCTCAAATCCAATTCTAATTGATCAATATTACTGTGATGGGCCAAAGCCATGCCAAAATCAGACATCCGCGATAAAAGTTGACGACATATCATATGTGGACATCAAAGGAACTTCAGCCACAGAAGAAGCAATAAGATTTGCATGCAGTGATAGCATCCCATGCCAGGGGTTATATTTGGAAGATATCCAACTTATAGCTTACACAGGAGTTGCAACTTCATTTTGTTGGAATGCACAAGGAACAAGTTCTGGGTTGCTTTTTCCTCCACCTTGCTTTCCAACCAATGAAAGTATGATTGCGCAGAAAGTTTCATCGAAGTCCCTTGATTCAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126562.p1 GENE.S_Transcript_126562~~S_Transcript_126562.p1 ORF type:complete len:189 (+),score=29.39,Glyco_hydro_28|PF00295.13|7.1e-47 S_Transcript_126562:1390-1956(+)
MVSNSSKILISDVICGPGHGISIGSLGKSHEWSEVHDVTVDHVYLSGTQNGVRIKTWQGGAGFVRRIMFRDVWMENVSNPILIDQYYCDGPKPCQNQTSAIKVDDISYVDIKGTSATEEAIRFACSDSIPCQGLYLEDIQLIAYTGVATSFCWNAQGTSSGLLFPPPCFPTNESMIAQKVSSKSLDSS*

Click here to download the sequence:
Link to NCBI Protein BLAST