Transcript Information: S_Transcript_126568.p1


Annotated TAIR IDAT1G80170.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30153646-30155683 | Reverse length=444
E-Value5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4006842755358
Replicate 23.0191185710283
Replicate 32.9120109605685
Condition 2: 8 Hour
Replicate 13.030450202961
Replicate 27.5357805944342
Replicate 33.5900374913653
Condition 3: 24 Hour
Replicate 13.4491921300938
Replicate 22.027814719989
Replicate 33.8496804618335


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126568.p1 GENE.S_Transcript_126568~~S_Transcript_126568.p1 ORF type:complete len:190 (+),score=26.97,Glyco_hydro_28|PF00295.13|1.5e-08,Pectate_lyase_3|PF12708.3|1.7e-06 S_Transcript_126568:288-857(+)
ATGAAATCCCCCATTAATTCAACCTCTTGTTGTTCAGATTGTGTTGTTAAATTGTTGGTCATTATTACTATAAGTGTGCTGTTGAATGTTAGTAACACAGTGGCATTTGAGTCTTTTTTGAAGCTCCCATTATCTGGGTTCTCTAGAAACAGACCCAGAATTGAAAGGGTTGTTCATGTTAATGCCTATGGAGCTGCAGGTGATGGGATTCATGATGATACTGAGGCTTTCAGAAATGCATGGAAAGTGGCATGTTCTTTGTCTCAGCGATCAACAATCGTCATTCCAGAGGGATACACTTATAAGGTGCAACCAATCGGTTTTGCTGGGTGCCAAGCCAGGGTGACTCTAAGGATTCTGGGTGCGATTGTTGCTCCTAAACATCCTGAAGCATGGCTTGGTTTGAACCCTCGCAAGTGGCTTTATTTCCATAGTGTAGAGCATCTAACTCTAGAAGGTGGAGGGACGATCAATGGGATGGGTGAGGAGTGGTGGAAACTGTCTTGCAAGTTCAATGCAACAATTGTATGTCCTCTCTTGTATATTGGAAGACATTCTAAATTCCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126568.p1 GENE.S_Transcript_126568~~S_Transcript_126568.p1 ORF type:complete len:190 (+),score=26.97,Glyco_hydro_28|PF00295.13|1.5e-08,Pectate_lyase_3|PF12708.3|1.7e-06 S_Transcript_126568:288-857(+)
MKSPINSTSCCSDCVVKLLVIITISVLLNVSNTVAFESFLKLPLSGFSRNRPRIERVVHVNAYGAAGDGIHDDTEAFRNAWKVACSLSQRSTIVIPEGYTYKVQPIGFAGCQARVTLRILGAIVAPKHPEAWLGLNPRKWLYFHSVEHLTLEGGGTINGMGEEWWKLSCKFNATIVCPLLYIGRHSKFL*

Click here to download the sequence:
Link to NCBI Protein BLAST