Transcript Information: S_Transcript_126568.p2


Annotated TAIR IDAT1G80170.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30153646-30155683 | Reverse length=444
E-Value4.2E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5748807629347
Replicate 23.6222490318308
Replicate 35.5052943533136
Condition 2: 8 Hour
Replicate 18.1163798968193
Replicate 27.1790260560317
Replicate 37.4764540107024
Condition 3: 24 Hour
Replicate 13.0974088531439
Replicate 23.7209242886541
Replicate 36.3996232072683


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126568.p2 GENE.S_Transcript_126568~~S_Transcript_126568.p2 ORF type:3prime_partial len:134 (+),score=18.65,Glyco_hydro_28|PF00295.13|3.5e-43 S_Transcript_126568:1763-2161(+)
ATGCCTAGTCTGGCTTACCTTACCAAGTATATTCTTCTCAAAGGTTCACAACTTTATGCAGGAGATGATTGTGTGTCTATGGTGAGCAATTCTTCAAAAATTCTAATTTCTGATGTTATTTGTGGTCCTGGCCATGGCATAAGTATTGGGAGCCTAGGGAAATCACATGAATGGTCCGAAGTGCACGATGTGACTGTTGATCATGTGTACTTATCTGGTACTCAGAATGGTGTGCGAATCAAAACCTGGCAGGGTGGTGCAGGTTTTGTAAGAAGGATTATGTTCCGCGATGTGTGGATGGAGAATGTCTCAAATCCAATTCTAATTGATCAATATTACTGTGATGGGCCAAAGCCATGCCAAAATCAGACATCCGCGATAAAAGTTGACGACATATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126568.p2 GENE.S_Transcript_126568~~S_Transcript_126568.p2 ORF type:3prime_partial len:134 (+),score=18.65,Glyco_hydro_28|PF00295.13|3.5e-43 S_Transcript_126568:1763-2161(+)
MPSLAYLTKYILLKGSQLYAGDDCVSMVSNSSKILISDVICGPGHGISIGSLGKSHEWSEVHDVTVDHVYLSGTQNGVRIKTWQGGAGFVRRIMFRDVWMENVSNPILIDQYYCDGPKPCQNQTSAIKVDDIS

Click here to download the sequence:
Link to NCBI Protein BLAST