Transcript Information: S_Transcript_126863.p1


Annotated TAIR IDAT2G02090.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)CHR19, CHA19, ETL1
Annotation TypeOrtholog
Chromosome Positionchr2:523481-526884 | Forward length=763
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.244320708162
Replicate 214.150083489574
Replicate 314.219866606515
Condition 2: 8 Hour
Replicate 118.435500975092
Replicate 219.810585594524
Replicate 314.144160560315
Condition 3: 24 Hour
Replicate 116.332623170538
Replicate 213.847165250502
Replicate 315.43966269659


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126863.p1 GENE.S_Transcript_126863~~S_Transcript_126863.p1 ORF type:complete len:856 (+),score=169.81,SNF2_N|PF00176.19|1.4e-52,Helicase_C|PF00271.27|1.6e-18,ResIII|PF04851.11|3.6e-06 S_Transcript_126863:278-2569(+)
ATGAAGACTAACAAGAGAGTTTTCGAAGAAATCTCCGACGATGAATGGGAGAACCAGTCCTTCAAACCCTCCAAAATTCTCAACCCCTCAAAACCACCGCCAATTGAATCCTTCTCCTTCAAGTCTCGCTCCTCCTCCTCATCTGCTCAACCTCCAAACAAAAACAATTTCGTCGTCGACCTATCAGACGACGAAGACGTAGAGGACAGAGTTCAGGTCGAGGATTTGGAGGACCATGACGTCGACGCTGACGTCACCGCCAGAAACGGAGGGTTTCGGAACTCGAATCGAGGACGGAGGTTCGTCGTCGACGACGATGACGAAGGAGAAGGAGACGGATTTGCGGAGGTTGTTGAATTGAAATCGGAAGAAGAGGAGGAAGCAGCAGGAACGGCGTCGTTTGACGAGGACGATGAGTTCGAAGACGAATTTGGGGAGGAAGAAGAAGAGGATGTGGTTGGGAGAGCGTTGCAAAAGTGTGCGAAGATATCGGCGGATCTTCGGAGAGAGCTTTATGGTTCTTCCAGTGCCGTTGCTTGTGATCGTTACGCTGAGGTTGATTCTTCTTCGGTCAAGATTGTCAATCAGGACCATGTCAGTGCAGCATGTGAGGCAGATGATTCAGATTTTCAGCCTCTTCTCAAACCATATCAACTTGTTGGTGTCAACTTTCTTCTGTTGCTGAAAAGGAAAAAAATTGGAGGAGCTATATTGGCAGATGAGATGGGTCTGGGGAAAACTGTTCAGGCTATCACATATTTAACTCTGCTGAATCACTTGGAAAACGATCCAGGCCCACATTTAGTTGTATGCCCTGCTTCTGTCTTGGAGAATTGGGAAAGAGAGCTTACAAAATGGTGTCCATCATTTTCAGTGGTGCAGTACCATGGAGCTGGGAGATCAGCATATGCAAAAGAGCTAAATGCATTGTCCAAAGCTGGATTACCACCTCCGTTTAACGTCCTTCTTGTTTGTTACTCACTTTTTGAACGCCACAGCGCACAACAGAAAGATGACAGAAAAATTCTGAAACGTTGGCGATGGAGCTGTGTATTAATGGATGAAGCACATGCATTGAAGGATAAAAACAGCTACAGATGGAAGAATTTGATGTCAGTAGCAAGCAATGCCAACCAGCGTTTGTTGCTCACTGGAACTCCACTGCAAAATGATTTACATGAACTGTGGTCATTGTTGGAGTTCATGCTGCCTGATCTTTTTAATACAGAGAATGTAGACTTGAAAAAGGTACTAAATGCGGATGATAGAGATTTGATAGCTCGGATGAAGTCCATCTTAGGGCCATTCATTTTGAGGCGCTTGAAATCTGATGTAATGCAGCAACTTGTAGCCAAGGAACAAAGGGTTGAGTTCGTGTGCATGGAAAAAGAACAGCAAGATGCTTATGATGAAGCCATTTTAGAGTATCGTGCAGCATCAGCTCACTTTCGTAAGAACTCAATAGTCAATTCTAGTGATATTGTTCAAGCTCTTCCACGCCGTCAGATTTCGAATTACTTTGTACAGTTTCGTAAGATTGCAAATCATCCTTTGCTTGTTAGACGTATCTACAAAGATGAGGATGTTGTTCGATTTGCCAAGAAGCTTTACCCAATGGGTGTTTTTGGTTACGAGTGTACTCTTGAGAGAGTAATTGAGGAAATGAAGGGTTATAGCGACTTTTCGATTCATCGGCTTCTGTACAATTATGGCATCAAGGATGCAAGGGGGATTCTTCCAGAAAATCAGGTTATGGAGTCTGCGAAATGCCGGGCTTTGGCTAAACTTCTTCCTTCTCTGGAACAAGATGGTCACCGTGTCCTCATATTTAGCCAGTGGACATCAATGCTCGATATCTTGGAGTGGGCTTTGGATGTGATTGGTGTCACTTATAGACGTCTTGATGGAAGTACGCAGGTCTCCGAGAGGCAAAGCATAGTGGACATGTTTAATAATGATACTTCAATATTTGCATGCTTGCTTTCCACTAGAGCTGGAGGGCAAGGTTTGAACCTCATTGGAGCTGATACAGTCATCATACATGATTTGGATTTCAACCCTCAAATTGACCGGCAGGCAGAGGACCGCTGTCATCGTATTGGCCAGACAAAACCTGTTACCATATACAGGTTAGTAACGAAAAGTACTGTTGATGAGAATGTTTATAACATTGCAAAACGGAAGCTAGTTTTGGATGCTGCTGTTTTGGAGAATGGTGCCGTGGTGGACAATGAAGGTGATATGCCTGAGAAGACTATGGGTGAGATATTGTCGTCGCTTTTGTTAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126863.p1 GENE.S_Transcript_126863~~S_Transcript_126863.p1 ORF type:complete len:856 (+),score=169.81,SNF2_N|PF00176.19|1.4e-52,Helicase_C|PF00271.27|1.6e-18,ResIII|PF04851.11|3.6e-06 S_Transcript_126863:278-2569(+)
MKTNKRVFEEISDDEWENQSFKPSKILNPSKPPPIESFSFKSRSSSSSAQPPNKNNFVVDLSDDEDVEDRVQVEDLEDHDVDADVTARNGGFRNSNRGRRFVVDDDDEGEGDGFAEVVELKSEEEEEAAGTASFDEDDEFEDEFGEEEEEDVVGRALQKCAKISADLRRELYGSSSAVACDRYAEVDSSSVKIVNQDHVSAACEADDSDFQPLLKPYQLVGVNFLLLLKRKKIGGAILADEMGLGKTVQAITYLTLLNHLENDPGPHLVVCPASVLENWERELTKWCPSFSVVQYHGAGRSAYAKELNALSKAGLPPPFNVLLVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVASNANQRLLLTGTPLQNDLHELWSLLEFMLPDLFNTENVDLKKVLNADDRDLIARMKSILGPFILRRLKSDVMQQLVAKEQRVEFVCMEKEQQDAYDEAILEYRAASAHFRKNSIVNSSDIVQALPRRQISNYFVQFRKIANHPLLVRRIYKDEDVVRFAKKLYPMGVFGYECTLERVIEEMKGYSDFSIHRLLYNYGIKDARGILPENQVMESAKCRALAKLLPSLEQDGHRVLIFSQWTSMLDILEWALDVIGVTYRRLDGSTQVSERQSIVDMFNNDTSIFACLLSTRAGGQGLNLIGADTVIIHDLDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKSTVDENVYNIAKRKLVLDAAVLENGAVVDNEGDMPEKTMGEILSSLLLG*

Click here to download the sequence:
Link to NCBI Protein BLAST