Transcript Information: S_Transcript_126896.p1


Annotated TAIR IDAT3G46640.3
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)PCL1
Annotation TypeHomolog
Chromosome Positionchr3:17183248-17184989 | Forward length=324
E-Value5E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7047474100827
Replicate 22.1984274292186
Replicate 31.9033428698378
Condition 2: 8 Hour
Replicate 18.7274729055882
Replicate 28.4392026897189
Replicate 39.7855670499736
Condition 3: 24 Hour
Replicate 11.3993163801804
Replicate 21.0485037384075
Replicate 31.6156469725697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_126896.p1 GENE.S_Transcript_126896~~S_Transcript_126896.p1 ORF type:complete len:281 (+),score=66.74,Myb_DNA-binding|PF00249.27|3.4e-08 S_Transcript_126896:278-1120(+)
ATGGAAGAGCAATCTGATATGAAAGTACCAGAATGGGGCATAGATCTCCCATCATTTGAAGATCTTACACCTATTACTCAGTCCTTGATATCCCCAGAGCTTGCTCTTGCTTTTGGGATAACTCCAGAACCTTCTAGACCGATGTTTGATCTCAACGTCGCCTCGCACCCCACCTATTCGACGAATTGCCCCAAAGAAGACTATGACAATTCTGAACCTCCCTTGAGGCTTTTCCCTGTTATGAATGATTCTGATGGGGGTAAGCATCTCAAAAGGGTTGATAGTTGTGGGCCTGATGATTCCAATTCTGGCTCCAAAGATGATAATGGTGATGACTCTGGGCTTAGCCGGGCTGTCAAGAGGCCCAGGTTGGTTTGGACCCCTCAACTCCACAAGCGTTTTGTTGATGTAATTGAGCATTTGGGGATTGATAAGGCTGTCCCCAAAACTATTATGGAGATGATGAATGTTGAGGGGCTTACTAGGGAGAATGTTGCCAGTCACTTGCAGAAGTATAGACTCTACTTGAAGAGGATGGAAGGAATCTCTAGTGAGGCCCATTCCGGCCACAGGCGGGCCCCCGGTTTCTTCGAGTATGATGGGTTTAGCCCTGTGCCAATGCAGCCTCAGCCTCAGCCACTACCACAACCACAGCCTCACCCTCACCCTCATCCACAGCAATGCAATGCCTTGCCTCTTATGCCAATGCCTATGGTCGGGCCGTCTGGCGGGCCTTATGGGTTTGGTCACTTGGGCTTGCCTGTTGGTACTTCTGCCCCTCCTGGATACTGTGGGCTCGAGTCTGGGGCGTACAACATGTTCTGGAATCGACAGCGTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_126896.p1 GENE.S_Transcript_126896~~S_Transcript_126896.p1 ORF type:complete len:281 (+),score=66.74,Myb_DNA-binding|PF00249.27|3.4e-08 S_Transcript_126896:278-1120(+)
MEEQSDMKVPEWGIDLPSFEDLTPITQSLISPELALAFGITPEPSRPMFDLNVASHPTYSTNCPKEDYDNSEPPLRLFPVMNDSDGGKHLKRVDSCGPDDSNSGSKDDNGDDSGLSRAVKRPRLVWTPQLHKRFVDVIEHLGIDKAVPKTIMEMMNVEGLTRENVASHLQKYRLYLKRMEGISSEAHSGHRRAPGFFEYDGFSPVPMQPQPQPLPQPQPHPHPHPQQCNALPLMPMPMVGPSGGPYGFGHLGLPVGTSAPPGYCGLESGAYNMFWNRQRG*

Click here to download the sequence:
Link to NCBI Protein BLAST