Transcript Information: S_Transcript_127060.p2


Annotated TAIR IDAT5G44050.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17722484-17726209 | Forward length=491
E-Value3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.132019846616
Replicate 254.142592764706
Replicate 352.254418903535
Condition 2: 8 Hour
Replicate 186.03691955533
Replicate 285.630179276195
Replicate 374.972981231314
Condition 3: 24 Hour
Replicate 159.759566330591
Replicate 265.907406078343
Replicate 357.981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127060.p2 GENE.S_Transcript_127060~~S_Transcript_127060.p2 ORF type:complete len:174 (+),score=22.79,MatE|PF01554.14|2.5e-15 S_Transcript_127060:1353-1874(+)
ATGGTGCCACTTGGAATATTTGCTGCCACAGGCGTACGAGTAGCCATTGAACTAGGGGCAGGAAATGCAAATGGTGCTAAGTTTGCTGCTAAAGTGTGTTTATTGACATCTTTAGTGATCGGCTTGATGTTCTTCGCACTGGTCATGGCCATCGCAGACAGACTTGCCGTGATCTTCACACCGAACTCATCGGTGGTCTCCATTGTTCATGAGCTAGCATTTTTGTTGGGCTTCACCATTTTCCTGAATAGCATTCCTCCTGTACTCTTAGGCATAGCAGTTGGGTCAGGTTGGCAAGCATTGGCAGCTTATGTAAACATTGGGAGTTATTACTTGGTGGGTTTTCCAATGGGGGTTTTCATAGGATGGGTGCTCAACTTTGGATACAAGGGAATCTGGGTTGGAATGCTTGGTGGGAGTGTGATTCAGATACTGCTGCTAACCTTCCTTGCACTCAGACGCGAATGGGAAAAGGAGGTTCATGATAAATACCTGCTGGTAAATAAAGCTGCGGCTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127060.p2 GENE.S_Transcript_127060~~S_Transcript_127060.p2 ORF type:complete len:174 (+),score=22.79,MatE|PF01554.14|2.5e-15 S_Transcript_127060:1353-1874(+)
MVPLGIFAATGVRVAIELGAGNANGAKFAAKVCLLTSLVIGLMFFALVMAIADRLAVIFTPNSSVVSIVHELAFLLGFTIFLNSIPPVLLGIAVGSGWQALAAYVNIGSYYLVGFPMGVFIGWVLNFGYKGIWVGMLGGSVIQILLLTFLALRREWEKEVHDKYLLVNKAAAD*

Click here to download the sequence:
Link to NCBI Protein BLAST