Transcript Information: S_Transcript_127098.p1


Annotated TAIR IDAT4G21350.1
Annotated Gene Nameplant U-box 8
Annotated Gene Symbol(s)B80, PUB8
Annotation TypeOrtholog
Chromosome Positionchr4:11356143-11357267 | Reverse length=374
E-Value2.1E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4064484569606
Replicate 27.5970926306537
Replicate 36.350564783504
Condition 2: 8 Hour
Replicate 11.4082804926409
Replicate 21.4773862309253
Replicate 31.8098361174041
Condition 3: 24 Hour
Replicate 16.0794722921937
Replicate 26.9488101531254
Replicate 37.1383144542781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127098.p1 GENE.S_Transcript_127098~~S_Transcript_127098.p1 ORF type:5prime_partial len:212 (+),score=30.14,Arm|PF00514.19|2e+03,Arm|PF00514.19|0.12,Arm|PF00514.19|0.025,Arm|PF00514.19|1.7e+03,Arm|PF00514.19|0.23 S_Transcript_127098:1-636(+)
AGTTTGGACTCCGATGACAACAAGGTAGGGCTGGTGGCGGAGGGGGCGGTGGGGAAGCTGGTGGCAGCCGCGTTGCCAACACGCGGCAATGCGGCTGCCTTGGCGGCGACGGTTTTTACGAGCCTCGCCGTCGTCGAGGTGAACAAGGCCACCATCGGCGCATACCCAGGCGCCGTGCGTGGCCTTGTTCACCTCCTTTCTACCGGGAAAGGAAGAGCTAGAAAAGAGGCGGCCACCTGCCTTTTTGCTATCTCTTCCTTTCCCGAGAACCGCCGCAGGGCGGTTGACTGCGGAGCAGTCCCGGTCCTCGTAAAGATGGCCCGGGCGGGACTGGAGCGGGCCGTGGAGGTGCTGGGGCTGCTCGCAAAGTGCCAACAAGGGAGAGAAGAGATGGCAAAGTGTGATGGAGTTGTTGAAATTTTGGTGGGTTTTGTAAGGGATGGAAGTTCAAGAGGTGTTCAATATGGGTTGATGGCACTCAATTGTCTTTGCTCTTGGAGTGAGGAGATCAAAGAGCAAGTTAGGAATGAAGGGGTTTTAGAGATTTGTTTGGGTTTAATTGAAGATGATAATGAAAAGATTAGGAGGGTTGCTTCTAATTTAGCCCAAGTTTTTCAAGACAAGAATGGAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127098.p1 GENE.S_Transcript_127098~~S_Transcript_127098.p1 ORF type:5prime_partial len:212 (+),score=30.14,Arm|PF00514.19|2e+03,Arm|PF00514.19|0.12,Arm|PF00514.19|0.025,Arm|PF00514.19|1.7e+03,Arm|PF00514.19|0.23 S_Transcript_127098:1-636(+)
SLDSDDNKVGLVAEGAVGKLVAAALPTRGNAAALAATVFTSLAVVEVNKATIGAYPGAVRGLVHLLSTGKGRARKEAATCLFAISSFPENRRRAVDCGAVPVLVKMARAGLERAVEVLGLLAKCQQGREEMAKCDGVVEILVGFVRDGSSRGVQYGLMALNCLCSWSEEIKEQVRNEGVLEICLGLIEDDNEKIRRVASNLAQVFQDKNGN*

Click here to download the sequence:
Link to NCBI Protein BLAST