Transcript Information: S_Transcript_127129.p1


Annotated TAIR IDAT2G47620.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3A
Annotated Gene Symbol(s)ATSWI3A, CHB1, SWI3A
Annotation TypeOrtholog
Chromosome Positionchr2:19532034-19534251 | Forward length=512
E-Value5.9E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.923712648812
Replicate 212.816714206325
Replicate 312.00191683805
Condition 2: 8 Hour
Replicate 112.170367557478
Replicate 212.996252787303
Replicate 313.290630704298
Condition 3: 24 Hour
Replicate 112.392412610507
Replicate 211.93035396438
Replicate 39.968508180557


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127129.p1 GENE.S_Transcript_127129~~S_Transcript_127129.p1 ORF type:complete len:587 (+),score=141.99,SWIRM|PF04433.13|3.5e-27,SWIRM-assoc_1|PF16495.1|3.6e-21,Myb_DNA-binding|PF00249.27|2.5e-10 S_Transcript_127129:97-1857(+)
ATGGAAACGAAAACAGCAGAGCATCGTCTCCCACTCCCTCTCCCTCTCCCTCTCCCACCTCCGCATCCAGCATATGTAACAGCAACAACAACAACAACAACAACTCCATCTCAACAACAACATCAATTTAAACCAACATCATGCTTTCCCGCTTCTATTCATACTGAACTCGACCTCTACACTATCCCAACTCATTCCTGTTGGTTCTCATGGGACTCCATTCACGAAACCGAGAGGATCGAGCTCAGGGAGTTCTTCGATGGCAGCTCCTTCACCCGAACCCCCAAAATCTACAAAGAGTATAGGGATTTCATCATCTCCAAGTACCGCGAAGATCCTTCCAGACGCCTCACCTTTACTCACGTCCGCAAGTCTCTCGTTGGTGACGTCTCTGCCCTTCGAAAGGTCTTTTATTTTCTTGATAAATGGGGCTTGATTAACTTCGCTGCCGTCCTCGAAAACCACAAACAGGATGATGTTAGTGTTAGGGTTAGGGTTGAGGAAGGCCCCCCCATTGGTGTTAGGGTTGTCGCCATTCCCAATTCCTCCAAGCCTTTGACGCTGCCTCCTCCTTTCGCTGCTCCTGGGGCTCATCATGCCTTTAAGTTGCCCCCTTTGACTTCTTATTCTGATGTTTTTGGGGGAGACAAGCTGCCGTGTGCCAATTGTAAACACACTTGTGATTCCAAGTATTATGAATCCACTCAGGAGAAATATGTGATATGCGTGAAATGCTTTGAGAAGGAGACATATGGGGAAAACAAGTCCAAAGGTGATTTCAAACTGAATGACAGCACAGAAAGTGGTGATTGTGAAGGAGAAGTGTGGACTGAGGCAGAAACCCTTCTTCTTCTAGAATCTGTTTTGAAGCATGGAGATGACTGGGACCTTGTGGCGCAAAATGTGCAGACCAAGACAAAACTCCAATGCATTTCACGCCTCATTGAGTTACCATTCGGGGAGCTCATGTTGGGTTCCCATGGAAAGATCTCCTCCAAAGGGGTTGTAGATGAAGTTGATGCTGGTCAGGAGCAGAAGCCTGCCATTGAATCCCAGGAAAATAACAAGGAGGATGATCATCATCCAGAGGTTATTGAAAGGGAGAACACTGAAGAGATTGAAAGCCTAGAACCACCTCCAAAGAAAAAACACATCGATTATTCAGATCCTAGTAGATCCTTGATGGAACAGGTAGCTCTCATTTCTACAATGGTTGGGCCACAAATAACAGCAACCGCGGCTTCTGCTGCTGTTTCAGTTCTCTCTGATGGGAACCCTTTGGTGAAGGAGATTTTCTACTCAGAGGACAACAATTCCATGGACGTGTGTAAATCAGGCAACCTCAGTATGGAACTGGACAGGGCCCTTCAACCAGAAGACATGGAAATGAAGGATGCTTCTCATTCATCAGAGGTTGACAAGTTATCGACTTCGAGAGATTCCATTCCTCTTGCCTTACGAATGAGAGCTGCAGTTGGTACGGCACTTGGGGCAGCTGCTGCTCGTGCCAGATTATTGGCTGATCAGGAAGAAAGGGAGATTGAGCATTTGATGGCATTCGTGATCGAGAATCAGTTGAAGAAATTGCAACGGAAAGCAAAGTTCTTTGATGATCTTGAGCATTTGTTGGAGAAGGAACGTGAACTATTAGATGAATCAAAAGACTCCATAATTGTCGAGAGGATGGATACCTTGGGGAGAATATTTGCTTCTGGGATTTCCCAATGGAGGGATCACAGATCATTGAAACTGCCGCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127129.p1 GENE.S_Transcript_127129~~S_Transcript_127129.p1 ORF type:complete len:587 (+),score=141.99,SWIRM|PF04433.13|3.5e-27,SWIRM-assoc_1|PF16495.1|3.6e-21,Myb_DNA-binding|PF00249.27|2.5e-10 S_Transcript_127129:97-1857(+)
METKTAEHRLPLPLPLPLPPPHPAYVTATTTTTTTPSQQQHQFKPTSCFPASIHTELDLYTIPTHSCWFSWDSIHETERIELREFFDGSSFTRTPKIYKEYRDFIISKYREDPSRRLTFTHVRKSLVGDVSALRKVFYFLDKWGLINFAAVLENHKQDDVSVRVRVEEGPPIGVRVVAIPNSSKPLTLPPPFAAPGAHHAFKLPPLTSYSDVFGGDKLPCANCKHTCDSKYYESTQEKYVICVKCFEKETYGENKSKGDFKLNDSTESGDCEGEVWTEAETLLLLESVLKHGDDWDLVAQNVQTKTKLQCISRLIELPFGELMLGSHGKISSKGVVDEVDAGQEQKPAIESQENNKEDDHHPEVIERENTEEIESLEPPPKKKHIDYSDPSRSLMEQVALISTMVGPQITATAASAAVSVLSDGNPLVKEIFYSEDNNSMDVCKSGNLSMELDRALQPEDMEMKDASHSSEVDKLSTSRDSIPLALRMRAAVGTALGAAAARARLLADQEEREIEHLMAFVIENQLKKLQRKAKFFDDLEHLLEKERELLDESKDSIIVERMDTLGRIFASGISQWRDHRSLKLPP*

Click here to download the sequence:
Link to NCBI Protein BLAST