Transcript Information: S_Transcript_127216.p1


Annotated TAIR IDAT1G48850.1
Annotated Gene Namechorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative
Annotated Gene Symbol(s)EMB1144
Annotation TypeOrtholog
Chromosome Positionchr1:18065154-18067956 | Reverse length=436
E-Value2.3E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1109.24697767318
Replicate 2124.56912916834
Replicate 3115.41447398436
Condition 2: 8 Hour
Replicate 1128.82872780624
Replicate 2128.97013199842
Replicate 3129.30640887314
Condition 3: 24 Hour
Replicate 1122.14182572709
Replicate 2118.75216339662
Replicate 3114.93881422971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127216.p1 GENE.S_Transcript_127216~~S_Transcript_127216.p1 ORF type:complete len:438 (+),score=105.08,Chorismate_synt|PF01264.17|2.2e-141 S_Transcript_127216:281-1594(+)
ATGGCGTCTTCTCTCTCCACCAAACCTTTTCTCGGTTCCAGCTCCTCCGGTGCTTCTTCCGGTCTCGGATCTCTTAACTCTGGCTCTCGCAAGCTTTTATCTCCTCCTTCCCAAATCTCCTTCCGTCGATCTCCCCGTAAACTCGAGGTTCAGGCAGCAGGAAGTACATATGGAAATTATTTCCGTGTAACAACATATGGTGAATCACATGGTGGTGGTGTTGGTTGTGTGATTGATGGCTGTCCCCCTAGACTTCCTATCAGCGAGGATGATTTACAAGAAGATCTTGATAGAAGGAGGCCTGGCCAAAGCCGGATCACTACTCCGAGGAAGGAAACAGATACTTGCAAGATAATTTCAGGAGTATCTGAAGGCGTGACTACCGGATCACCAATTGCAGTGAATGTACCCAATACTGATCAAAGGGGACATGACTACAAGGAGATGTCCTTGGCTTATAGACCTTCTCATGCTGATGCAACTTATGATTTCAAGTATGGTGTCAGATCTATACAGGGTGGTGGACGATCTTCTGCTAGAGAAACTATTGGTAGAGTTGCAGCTGGAGCCATAGCTAAGAAGATTCTAAAGAAGTTTTCCGGCACCGAGGTCCTTGCCTATGTTTCCCAAGTGCACAATGTTGTGCTGCCAGAGGGTTTGGTCAATCATGAAACTTTGAGTCTTGAAGAGATAGAGAGTAATATTGTCAGATGCCCTGATCCAGAATACGCAGAAAAAATGATTGCTGCCATTGATGCCGTCCGAGTGAAAGGGGATTCAGTTGGCGGTGTTGTCACATGTATAGTTCGGAATGCTCCACGTGGACTTGGTTCACCGGTCTTTGACAAACTGGAAGCTGAGCTGGCTAAAGCTGCTATGTCATTACCTGCTACTAAGGGTTTTGAATTTGGTAGTGGCTTTGCAGGTACCTTTATGACTGGGAGTGAACATAATGATGAGTTCTATATGGATGAACAGGGAAAAATTAGGACAAAAACAAACCGCTCTGGTGGTATACAGGGAGGAATATCCAATGGTGAAATCATCAACATGAGAATAGCATTCAAGCCGACTTCTACAATTGGAAAAAAGCAGCATACTGTTACGAGAAGCAAGGAGGAGACTGACCTTATTGCACGAGGACGACATGATCCTTGTGTTGTTCCACGAGCGGTGCCAATGGTTGAAGCCATGGTTGCATTGGTGCTGGTCGATCAACTGCTGGCACAGTATGCACAGTGTGAGCTGTTCCCGATCAACCCTGCCCTGCAGGAACCCATGGAGTTGCCTGAGCTAGATGAAGCAAATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127216.p1 GENE.S_Transcript_127216~~S_Transcript_127216.p1 ORF type:complete len:438 (+),score=105.08,Chorismate_synt|PF01264.17|2.2e-141 S_Transcript_127216:281-1594(+)
MASSLSTKPFLGSSSSGASSGLGSLNSGSRKLLSPPSQISFRRSPRKLEVQAAGSTYGNYFRVTTYGESHGGGVGCVIDGCPPRLPISEDDLQEDLDRRRPGQSRITTPRKETDTCKIISGVSEGVTTGSPIAVNVPNTDQRGHDYKEMSLAYRPSHADATYDFKYGVRSIQGGGRSSARETIGRVAAGAIAKKILKKFSGTEVLAYVSQVHNVVLPEGLVNHETLSLEEIESNIVRCPDPEYAEKMIAAIDAVRVKGDSVGGVVTCIVRNAPRGLGSPVFDKLEAELAKAAMSLPATKGFEFGSGFAGTFMTGSEHNDEFYMDEQGKIRTKTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQHTVTRSKEETDLIARGRHDPCVVPRAVPMVEAMVALVLVDQLLAQYAQCELFPINPALQEPMELPELDEANV*

Click here to download the sequence:
Link to NCBI Protein BLAST