Transcript Information: S_Transcript_127293.p1


Annotated TAIR IDAT3G53700.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)MEE40
Annotation TypeOrtholog
Chromosome Positionchr3:19900303-19902567 | Forward length=754
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.958162905088
Replicate 214.034706446272
Replicate 316.077044805861
Condition 2: 8 Hour
Replicate 113.342325355484
Replicate 215.549020455098
Replicate 315.819483759194
Condition 3: 24 Hour
Replicate 111.122591201363
Replicate 212.696480830729
Replicate 313.04019311521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127293.p1 GENE.S_Transcript_127293~~S_Transcript_127293.p1 ORF type:complete len:764 (+),score=153.10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|8.9e-10,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|8.7e-14,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|3.8e-15,PPR_2|PF13041.2|1.9e-18,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|9.4e-14,PPR_2|PF13041.2|3.8e-17,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|3.8e-07,PPR_2|PF13041.2|5.1e-11,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|1.4e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|3.8e-05,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|6.2e-11,PPR_1|PF12854.3|1.2e-13,PPR_1|PF12854.3|8.6e-17,PPR_1|PF12854.3|2e-12,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|7.9e-13,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.9e+03,PPR|PF01535.16|7.2e+03,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.019,PPR|PF01535.16|23,PPR|PF01535.16|0.00054,PPR|PF01535.16|0.00013,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|4.6e-09,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.00035,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|4e-10,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|0.00019,PPR|PF01535.16|3.6,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|26,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|5.9e-05,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|1.6e+02,MRP-S27|PF10037.5|2.7e+02,MRP-S27|PF10037.5|0.025,MRP-S27|PF10037.5|0.31,MRP-S27|PF10037.5|0.0027,MRP-S27|PF10037.5|0.007,MRP-S27|PF10037.5|0.091,MRP-S27|PF10037.5|0.0068,MRP-S27|PF10037.5|6.7e+02,Clathrin|PF00637.16|2.8e+02,Clathrin|PF00637.16|0.11,Clathrin|PF00637.16|40,Clathrin|PF00637.16|13,TPR_19|PF14559.2|6.7e+03,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|72,TPR_19|PF14559.2|43,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|46,TPR_19|PF14559.2|7.9,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|9.8e+02,TPR_19|PF14559.2|2.6e+03,ATP13|PF12921.3|2.8e+03,ATP13|PF12921.3|6.1e+02,ATP13|PF12921.3|19,ATP13|PF12921.3|37,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|4.8e+02,ATP13|PF12921.3|4.9e+03,ATP13|PF12921.3|1.4e+02,ECSIT|PF06239.7|1.5e+02,ECSIT|PF06239.7|1.4e+02,ECSIT|PF06239.7|88,ECSIT|PF06239.7|43,ECSIT|PF06239.7|2.6,ECSIT|PF06239.7|77 S_Transcript_127293:186-2477(+)
ATGGCAGCTTCAATGGCTTCCTTTGCTCACCTCAGCCCGAAATACCCCTACCCTCCTCCAACTTTCCTCTCTCCTCTCAAACCCACTTCACTCCCACTCCTATTCCCACGCCCCCCTCCTCACTCTCTCTCCTCCACGTCATCACAAGCTCTCACCACCCACCACCTCCCTCCAAACTTCACCCCAAAACAATTCCTGGAAACCCTCCGCAAAGAAAGAGACCCAGAAATGGGCCTCTGGCTCTTCGACTGGGCCTCAGCCCAAGCCCATTTCACCCCCACCTTACCCCTCTACGAAGAACTCCTCCGTAAGCTCGGCTCCCAAGGCTCCTTCGACTCCATGGCACGTGTCCTCCAAGAAACAAAGAATTCTGGGAGCTCCGTCATCAATGAAGGTACTTTCTTGATTCTCATTGATTCCTATGCGGGTTCTGGTTTGTTTGATGAAGCTGCTAGTGTTATTGACCTGATGGAACATGAGTTTGGTCTCACCTGTGGGACCCATTTTTTCAATTACTTGCTGAATGTTCTTGTTGATGGGAATAAGTTGAAGTTAGTTGAGGCTGTTCATGCTAGGATGGTTGAATCTGGGGTTAGCCCTGATGTTTCAACTTTTAATATTTTGATTAAAGGGTTATGTAAAGCTCATCAAATTAGGCCTGCCCTTTTGATGATGGAGGAAATGGAGGCTTATGGGCTGAGCCCTGATGAGAAGACATATACAACCATTATGCAGGGTTATATCGAGGAAGGGGATTTGGATGGTGCTTTGAGGGTTAGAGACATGATGGTTGATGCCGGTTGTTGCTCGAGTAATGTGACTGTTAATGTGTTGGTTTATGGGTTTTGTAAGGAGGGGAGGTTGGAGGAAGGTTTGGAGTTTTTGCAGGAAATGGCGCGTCAAGGGTTTGACCCTGATCAGTTTACTTTTAATACTTTGATTAGTGGGTTGTGCAAGGGAGGTCATGTTAAGCACGCGTTGGAGATCTTGGATGAGATGCTTGAAGAAGGGTTTGATCCGGATGTTTTTACTTACAATGCTTTGATATCCGGGTTGTGCAAGATTGGGGAGGTTGAAGAGGCGATGGAAGTGCTCGAGTTGATGATTTTGAAGGATTGCACCCCTAATACGGTTACCTATAATGCTTTGATTAACACCATGTGTAAAGATAACCAAGTTGAAAAGGCTACTGAGTTTGTCCGTTTGCTTACTAGCAAAGGGGTGCTGCCTGATGTGTGTACGTTCAATTCTCTTATACAAGGACTTTGCTTGTCGAGAAATCACAGAGTCGCTATGGAGCTGTTTGAGGAGATGAAAACTAAGGGGTGTGAGCCTGATGAATTTACTTATAATATGTTGATTGACAGTTTGTGTACTAGAGGAAAAATAGATGAAGCATTGAACCTGCTCAAGGACATGGAATCGAGTGGCTGTGCAAGAAACGTGGTGACATATAATACATTAATTGACGGGTTCTGCAAAAACAAGAGGATTGAAGATGCCGAGGAGGTTTTTGATCAGATGGAACTGCAAGGGGTTTCGAGAAACATGGTTACATACAATACCCTTATTGATGGTCTTTGTAAAAGTAAGAGGGTAGAGGATGCCGCTCTATTTTTGGACCAGATGTTAATGGAAGGGCTAAAACCTGATAAGTACACCTATAATTCCCTGCTTTCTCATTTTTGTAGGGCAGGTGATATTCAAAAGGCGGCAGATATAGTGCAAACTATGACCTCTAATGGATGTGAACCAGATATTGTCACATACGGGACTTTAATTCAAGGGCTGTGTAAGGCAGGTCGGGTTGAGGTTGCCACTCGACTCCTCAGAAGCATTCAGATGAAAGGAATGGTTCTGACCCCTCAGGCATACAATCCTGTGATACAAGCTCTTTTCAAAAAGAGAAGATCAAAGGAAGCTACTAGGCTCTTTCGAGAAATGATGGAAAAGGGTGACCCTCCAGATGCTATCAGCCACAAGATAGTCTTCCGCGGTCTTTGCTCCAGTGGAGGACCGATTGTAGAAGCTGTAGATTTCTTATTTGAGATGTTGGAGAGAGGATTTGTGCCAGAATTCCCATCATTTTTGATGCTGGCTGATGGTCTTTGCTCCTTGTCAATGGAAGACACCCTAGTGAAGCTTGTTGATAAGATCATGAAGCAAGGAAGATTCTCAGATAGTGAGGTTTCTATGATCAGGGGCTTCCTTAAAATTCGCAAGTTCCAAGACGCATTGGCTACTCTTGGCCGTGTTTTGAATGACCGATTCCCCAAGAGAGTTTATCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127293.p1 GENE.S_Transcript_127293~~S_Transcript_127293.p1 ORF type:complete len:764 (+),score=153.10,PPR_2|PF13041.2|16,PPR_2|PF13041.2|8.9e-10,PPR_2|PF13041.2|3.6e-11,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|8.7e-14,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|3.8e-15,PPR_2|PF13041.2|1.9e-18,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|9.4e-14,PPR_2|PF13041.2|3.8e-17,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|3.8e-07,PPR_2|PF13041.2|5.1e-11,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|1.4e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|3.8e-05,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.4e-13,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|6.2e-11,PPR_1|PF12854.3|1.2e-13,PPR_1|PF12854.3|8.6e-17,PPR_1|PF12854.3|2e-12,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|7.9e-13,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|2.9e+03,PPR|PF01535.16|7.2e+03,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.019,PPR|PF01535.16|23,PPR|PF01535.16|0.00054,PPR|PF01535.16|0.00013,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|4.6e-09,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.00035,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|4e-10,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|0.00019,PPR|PF01535.16|3.6,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|26,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|2e-05,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|5.9e-05,PPR_3|PF13812.2|1.2e-07,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|1.6e+02,MRP-S27|PF10037.5|2.7e+02,MRP-S27|PF10037.5|0.025,MRP-S27|PF10037.5|0.31,MRP-S27|PF10037.5|0.0027,MRP-S27|PF10037.5|0.007,MRP-S27|PF10037.5|0.091,MRP-S27|PF10037.5|0.0068,MRP-S27|PF10037.5|6.7e+02,Clathrin|PF00637.16|2.8e+02,Clathrin|PF00637.16|0.11,Clathrin|PF00637.16|40,Clathrin|PF00637.16|13,TPR_19|PF14559.2|6.7e+03,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|72,TPR_19|PF14559.2|43,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|46,TPR_19|PF14559.2|7.9,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|9.8e+02,TPR_19|PF14559.2|2.6e+03,ATP13|PF12921.3|2.8e+03,ATP13|PF12921.3|6.1e+02,ATP13|PF12921.3|19,ATP13|PF12921.3|37,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|4.8e+02,ATP13|PF12921.3|4.9e+03,ATP13|PF12921.3|1.4e+02,ECSIT|PF06239.7|1.5e+02,ECSIT|PF06239.7|1.4e+02,ECSIT|PF06239.7|88,ECSIT|PF06239.7|43,ECSIT|PF06239.7|2.6,ECSIT|PF06239.7|77 S_Transcript_127293:186-2477(+)
MAASMASFAHLSPKYPYPPPTFLSPLKPTSLPLLFPRPPPHSLSSTSSQALTTHHLPPNFTPKQFLETLRKERDPEMGLWLFDWASAQAHFTPTLPLYEELLRKLGSQGSFDSMARVLQETKNSGSSVINEGTFLILIDSYAGSGLFDEAASVIDLMEHEFGLTCGTHFFNYLLNVLVDGNKLKLVEAVHARMVESGVSPDVSTFNILIKGLCKAHQIRPALLMMEEMEAYGLSPDEKTYTTIMQGYIEEGDLDGALRVRDMMVDAGCCSSNVTVNVLVYGFCKEGRLEEGLEFLQEMARQGFDPDQFTFNTLISGLCKGGHVKHALEILDEMLEEGFDPDVFTYNALISGLCKIGEVEEAMEVLELMILKDCTPNTVTYNALINTMCKDNQVEKATEFVRLLTSKGVLPDVCTFNSLIQGLCLSRNHRVAMELFEEMKTKGCEPDEFTYNMLIDSLCTRGKIDEALNLLKDMESSGCARNVVTYNTLIDGFCKNKRIEDAEEVFDQMELQGVSRNMVTYNTLIDGLCKSKRVEDAALFLDQMLMEGLKPDKYTYNSLLSHFCRAGDIQKAADIVQTMTSNGCEPDIVTYGTLIQGLCKAGRVEVATRLLRSIQMKGMVLTPQAYNPVIQALFKKRRSKEATRLFREMMEKGDPPDAISHKIVFRGLCSSGGPIVEAVDFLFEMLERGFVPEFPSFLMLADGLCSLSMEDTLVKLVDKIMKQGRFSDSEVSMIRGFLKIRKFQDALATLGRVLNDRFPKRVYR*

Click here to download the sequence:
Link to NCBI Protein BLAST