Transcript Information: S_Transcript_127357.p1


Annotated TAIR IDAT3G51320.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19049853-19051445 | Reverse length=530
E-Value4.2E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2668655225878
Replicate 22.067211968762
Replicate 32.1364668716948
Condition 2: 8 Hour
Replicate 14.1052284596866
Replicate 22.9727499044271
Replicate 33.5586934672712
Condition 3: 24 Hour
Replicate 12.9771561827045
Replicate 21.9304779877638
Replicate 32.1054176760659


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127357.p1 GENE.S_Transcript_127357~~S_Transcript_127357.p1 ORF type:complete len:587 (+),score=91.68,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|21,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|2e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0027,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|2.2,PPR|PF01535.16|19,PPR|PF01535.16|3.5e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|5.4e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|1.7e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|64,PPR_1|PF12854.3|3.5e+02 S_Transcript_127357:35-1795(+)
ATGGCAAGAGTCTTAAAACAATGTTTCTCGTGTCTAAAGATCCCTGCTTTATCTTTCTCTTTCTCTTTTACTATATTTCCATTTCGTCGTTGCTATTCTTGCCCTAGTAGTCTCTCTTTCACTTATCAACTTGTGAGTTACTTGAATCAGTGCTTAACAAAGTCCCACTTTTACCAAATCCATGCCCACTTGATCACGTCTAATCGACTTCAAAATCCTTTTCTTGGTAGTAAGTTGCTCAAAGTTTCAACCTTGCTTGAAGATTTGGGTTACACTTTATTGGTTTTTAGGAGTTTGAATTTCCCAGATATTGTTTGCCTTAACACTGTTATTAAGGCTTACTCTAGTAGCTCTGTGCCCCACCAAGGTGTAGCCTTATACTTGGAAATGTTGAAATGTGGCGTTTCTCCTAATTCATTTACTTTCCCTCCTTTACTTGGTTGTTGTGCTAAAGTTGGTAGCTCTAGGACTGGTGAAATGTGTTATGGGCAAGCTATTAAGAATGGGTTTGACTGTGTGGTTGAGATACAGAACTCTTTGATTCATATGTATGCTTCTTGTGGACTTATTGAGTTTGCTTGGAATGTGTTTGATGCTATGCTAAGTAAGGATTTGGTGTCATGGAATTCTATTATTGGTGGGTTGGTGAAAATGGGTGATTTGAGGAGTGCACACAAACTGTTCGATGAAATGCCTGAGAGGAATGTGGTGTCTTGGAATGTTATGATGGCTGGGTACTTAGATGGGAACAATCCGGGATGTGCCCTGAAGCTTTTTAGAGAGATGGTGGGAAGAGGATTCTTAGGAAACGACACGACTATGGTTAGTGTGATTACTGCTTGTGGGAGGTCTGCTAGAGTGAAAGAGGGAGCATCGATACATGGGTTTCTTGTGAGGAGGTTATGGAATTTGAGTTTGATCTTGAACACAGCCCTGATTGATATGCATTGCAAATGCCAAAAGGTTGAGGTTGCGCGTAGTATTTTTGATAGGTTGCAGGAGAAAAATTTGGTGTGTTGGAATGTAATGATCTTGGGGCATTGTCTTCATGGAAATCCTGAAGATGGGCTTCATTTATTTGAAGACATGGTTTCTGGGACAAAGTTAGATAATGAAGGTGAACTTGTGAACTCAGGTGGGAGGGGAAGAGTGGTGCCTGATGAAATCACCTATGTTGGCGTTCTGTGTGCTTGTACTCGTGCAGGGATGTTGGCGAAAGGCAAAATCTATTTTAATCAGATGGTTAATTTGTTCTGTATAAAACCTAATTTTGCACATTACTGGTGCATGGCTAATATCCTTTTGAGCAATGGGCTTGTGGATGAAGCGTTAGGAAGTCTTAGGAAAGCTAATGAGTTTGTTGGTGATATGTCGATAGAATCCTCTGTGTGGGCAAGTTTGCTTGGCTCATGCAGATTGCAAGGTGACACATCTCTACCAGAACAAGTTGCAAGAGCACTAATTGAAGTAGAGCCACAAAATGCAATGTGCTATGCACTACTCTATAATATGTATGCTGCTGCTAGTAAGAGGGAGGATGCTGCTGAAGTGAAGAACTTGATGAAGCAAAGAGTGTGCGGAAAAATGCCTGGTTCCAGTCTGGTCAACTTAATAGAAATTGTTCACGGTTTTAGGTTAGGAAACAGAAAGCAGTGTGGAACAGAGGTAGCCGTGATGTTGGATGCATTGGTTGAGAGGCTGAATCTGTCAAATACTGATCAAAAGCAAGCACCAATACGCAAGACAGAATGTCAAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127357.p1 GENE.S_Transcript_127357~~S_Transcript_127357.p1 ORF type:complete len:587 (+),score=91.68,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|21,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|2e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0027,PPR|PF01535.16|8.5e-08,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|2.2,PPR|PF01535.16|19,PPR|PF01535.16|3.5e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|5.4e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.47,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|1.7e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|0.29,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|64,PPR_1|PF12854.3|3.5e+02 S_Transcript_127357:35-1795(+)
MARVLKQCFSCLKIPALSFSFSFTIFPFRRCYSCPSSLSFTYQLVSYLNQCLTKSHFYQIHAHLITSNRLQNPFLGSKLLKVSTLLEDLGYTLLVFRSLNFPDIVCLNTVIKAYSSSSVPHQGVALYLEMLKCGVSPNSFTFPPLLGCCAKVGSSRTGEMCYGQAIKNGFDCVVEIQNSLIHMYASCGLIEFAWNVFDAMLSKDLVSWNSIIGGLVKMGDLRSAHKLFDEMPERNVVSWNVMMAGYLDGNNPGCALKLFREMVGRGFLGNDTTMVSVITACGRSARVKEGASIHGFLVRRLWNLSLILNTALIDMHCKCQKVEVARSIFDRLQEKNLVCWNVMILGHCLHGNPEDGLHLFEDMVSGTKLDNEGELVNSGGRGRVVPDEITYVGVLCACTRAGMLAKGKIYFNQMVNLFCIKPNFAHYWCMANILLSNGLVDEALGSLRKANEFVGDMSIESSVWASLLGSCRLQGDTSLPEQVARALIEVEPQNAMCYALLYNMYAAASKREDAAEVKNLMKQRVCGKMPGSSLVNLIEIVHGFRLGNRKQCGTEVAVMLDALVERLNLSNTDQKQAPIRKTECQT*

Click here to download the sequence:
Link to NCBI Protein BLAST