Transcript Information: S_Transcript_127554.p1


Annotated TAIR IDAT2G28050.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11938265-11939653 | Reverse length=462
E-Value6E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.519135377061
Replicate 21.2593981354184
Replicate 31.3646844882157
Condition 2: 8 Hour
Replicate 12.7502088992497
Replicate 22.4121866398014
Replicate 33.0644347508218
Condition 3: 24 Hour
Replicate 11.8011637550384
Replicate 21.437451051354
Replicate 32.0262953221869


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127554.p1 GENE.S_Transcript_127554~~S_Transcript_127554.p1 ORF type:complete len:473 (+),score=82.74,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|8.7e-06,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|4.5e-07,PPR_2|PF13041.2|0.023,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.033,PPR|PF01535.16|10,PPR|PF01535.16|0.00095,PPR|PF01535.16|6.5,PPR|PF01535.16|9.4e-05,PPR|PF01535.16|8.5e-05,PPR|PF01535.16|0.007,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.00025,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|11 S_Transcript_127554:117-1535(+)
ATGACAGTCCAAGATTTCCTCAAAACTCTCAGAACTGCAAAAAATGCAGCACTACCATCATCAACAACCCAACTTTCTTCTTCCCTATACAACCAAACTACTACTACACAAACCCTCTCTAAAACCCTAATCTTCAACTCATCTTCTAATACCCAAAATGTAACATCTTTCCTTCAATCCCTCACTTCCTACAAATTCCAGTCATTTCTTTCTGACCCACATGTTTATACCTTTGATTGTTTAAGAATCTTCAATGCTGTACTTCGTTTACAACCTGAACTTCCCTTTAAGCCTGATCTTCATGCACATTTAACCCTCATTTGCAGGCTTATCAAGTCAAGGGACTTCTCAGCTGCCGAGATTCTGTTGAAAAATGCTGCCTTTCATAGAAATTACAGGTACCCTTTTTCTGATTTTACTAGTTGGGTTGAGAATTATTGTCCTGAATCAAGAATTATTACCAAGTTGTTGAATATGTTGCTTAAGATGTATTCTGATCATAGAATGTTTGACATGGCTTGTACTACTTTTGATTATATGGTTGAGAAAGGGATTGAGAGGGATGAGAAAACTTGTTCTGTTCATTTATATGCCATGATTACTTGTGATAAGGTTGATGTAGCTTTCGAGTTTTTTCATCGAATGTTGGGGTCAGGGATGGAGGTTTCTGTGTATTCAGTGACTATTGTGGTGAGTGGGTTGTGCAAAGTTGGGGAGTTAAAGATGGGGAGAGAATTGGTGGAGGATATGTCTAGGAAAGGGGTTAAACCCAATATTATAACATTTAATACTTTAGTGGATGGGTGTGTGAGAAGGTGGAGTGTTACTGAGCTAGATCATGTTTTGTGTTTGGTGGAACGAGAATGCGTTCAGTTTAATGATACGACTTATAAGCTTCTAATCGAGGGCTATTCTGGTTGTGAAATGATCGAAGAAGCAGAGAAGTTGCTTATGGAGATGAATGACAAAGGCATTGAGGCTGAGATTTATTTGTTTCATATAGTTATTAGAGGGTATTGTCGGTTGGGAAACATAAGCAGTGGGCTTGCGGTTTTCAGAAAAATGCAAGAGAGGGAGCTTAACCCTAGTGTTGATATTTATTGGTGTATAATCAATGGTCTGTGTGAGGCTGGAGAGATCAGTCTTGTGAAGAACTTGGTGGAGGAGATGCAATGCAAGGGCGGTGAGCCGGATGATGTTATGTGTAATACCCTGATTGATGTGTATAGCAGGAATGGTATGATGGATGAAGTTGCAGAATTGCAGCGTATGAGGATGATGAAATGTTCGGCTGTAGACCCGTCTTTCATGAACTCCATAGATTCAGAGACCGAAATTGAATTGGCGACAGATTCAGAGTCTGAAATTGAGTTGGTCATGGATGAGGCAAAGCCTATGATACTGGATGACTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127554.p1 GENE.S_Transcript_127554~~S_Transcript_127554.p1 ORF type:complete len:473 (+),score=82.74,PPR_2|PF13041.2|5.9e+02,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|8.7e-06,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|4.5e-07,PPR_2|PF13041.2|0.023,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.033,PPR|PF01535.16|10,PPR|PF01535.16|0.00095,PPR|PF01535.16|6.5,PPR|PF01535.16|9.4e-05,PPR|PF01535.16|8.5e-05,PPR|PF01535.16|0.007,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|24,PPR_1|PF12854.3|0.00088,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|0.34,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.00025,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|58,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|11 S_Transcript_127554:117-1535(+)
MTVQDFLKTLRTAKNAALPSSTTQLSSSLYNQTTTTQTLSKTLIFNSSSNTQNVTSFLQSLTSYKFQSFLSDPHVYTFDCLRIFNAVLRLQPELPFKPDLHAHLTLICRLIKSRDFSAAEILLKNAAFHRNYRYPFSDFTSWVENYCPESRIITKLLNMLLKMYSDHRMFDMACTTFDYMVEKGIERDEKTCSVHLYAMITCDKVDVAFEFFHRMLGSGMEVSVYSVTIVVSGLCKVGELKMGRELVEDMSRKGVKPNIITFNTLVDGCVRRWSVTELDHVLCLVERECVQFNDTTYKLLIEGYSGCEMIEEAEKLLMEMNDKGIEAEIYLFHIVIRGYCRLGNISSGLAVFRKMQERELNPSVDIYWCIINGLCEAGEISLVKNLVEEMQCKGGEPDDVMCNTLIDVYSRNGMMDEVAELQRMRMMKCSAVDPSFMNSIDSETEIELATDSESEIELVMDEAKPMILDDLK*

Click here to download the sequence:
Link to NCBI Protein BLAST